David PFLIEGER

Ingénieur d’études / Engineer
Plateforme : Bioinformatique
Téléphone : 03 67 15 53 76

Ses publications

  • GIRAUDO P., SIMONNOT Q., PFLIEGER D., PETER J., GAGLIARDI D. and ZUBER H.

    Nano3'RACE: A Method to Analyze Poly(A) Tail Length and Nucleotide Additions at the 3' Extremity of Selected mRNAs Using Nanopore Sequencing.

    In: Eugene Valkov, Aaron C. Goldstrohm (eds) Deadenylation. Methods in Molecular Biology, vol 2723. Humana New York, NY., 2024. | DOI : doi: 10.1007/978-1-0716-3481-3_14DOI logo

  • ELSER D., PFLIEGER D., VILLETTE C., MOEGLE B., MIESCH L. and GAQUEREL E.

    Evolutionary metabolomics of specialized metabolism diversification in the genus Nicotiana highlights N-acylnornicotine innovations

    Science Advances, 9(34), 2023. | DOI : 10.1126/sciadv.ade8984DOI logo

  • COGNAT V., PAWLAK G., PFLIEGER D. and MARÉCHAL-DROUARD L.

    PlantRNA 2.0: an updated database dedicated to tRNAs of photosynthetic eukaryotes

    Plant Journal, 0, 2022. | DOI : 10.1111/tpj.15997DOI logo

  • ELSER D., PFLIEGER D., VILLETTE C., MOEGLE B., MIESCH L. and GAQUEREL E.

    Evolutionary metabolomics of specialized metabolism diversification in the genus Nicotiana highlights allopolyploidy-mediated innovations in N-acylnornicotine metabolism

    Science Advances, , 2022.

  • SCHEER H., DE ALMEIDA C., FERRIER E., SIMONNOT Q., POIRIER L., PFLIEGER D., SEMENT F., KOECHLER S., PIERMARIA C., KRAWCZYK P., MROCZEK S., CHICHER J., KUHN L., DZIEMBOWSKI A., HAMMANN P., ZUBER H. and GAGLIARDI D.

    The TUTase URT1 connects decapping activators and prevents the accumulation of excessively deadenylated mRNAs to avoid siRNA biogenesis

    Nature Communications, 12:1298, 2021. | DOI : 10.1038/s41467-021-21382-2DOI logo

  • BÖHRER M., RYMEN B., HIMBER C., GERBAUD A., PFLIEGER D., LAUDENCIA-CHINGCUANCO D., CARTWRIGHT A., VOGEL J., SIBOUT R. and BLEVINS T.

    Integrated genome-scale analysis and northern blot detection of retrotransposon siRNAs across plant species

    In: Heinlein M. (ed) RNA tagging. Methods in Molecular Biology, vol 2166. Humana New York, NY., 2020. | DOI : 10.1007/978-1-0716-0712-1_23DOI logo

  • PITZALIS N., AMARI K., GRAINDORGE S., PFLIEGER D., DONAIRE L., WASSENEGGER M., LLAVE C. and HEINLEIN M.

    Turnip mosaic virus in oilseed rape activates networks of sRNA-mediated interactions between viral and host genomes

    Communications Biology, 3:702, 2020. | DOI : 10.1038/s42003-020-01425-yDOI logo

  • HUMMEL G., BERR A., GRAINDORGE S., COGNAT V., UBRIG E., PFLIEGER D., MOLINIER J. and MARÉCHAL-DROUARD L.

    Epigenetic silencing of clustered tDNAs in Arabidopsis

    Nucleic Acids Research, 48:10297-10312, 2020. | DOI : 10.1093/nar/gkaa766DOI logo

  • LANGE H., NDECKY S., GOMEZ-DIAZ C., PFLIEGER D., BUTEL N., ZUMSTEG J., KUHN L., PIERMARIA C., CHICHER J., CHRISTIE M., KARAASLAN E.S., LANG P.L., WEIGEL D., VAUCHERET H., HAMMANN P. and GAGLIARDI D.

    RST1 and RIPR connect the cytosolic RNA exosome to the Ski complex in Arabidopsis

    Nature Communications, 10:3871, 2019. | DOI : 10.1038/s41467-019-11807-4DOI logo