David PFLIEGER

Publications

• GIRAUDO P., SIMONNOT Q., PFLIEGER D., PETER J., GAGLIARDI D. and ZUBER H.

  Nano3'RACE: A Method to Analyze Poly(A) Tail Length and Nucleotide Additions at the 3' Extremity of Selected mRNAs Using Nanopore Sequencing.

  In: Eugene Valkov, Aaron C. Goldstrohm (eds) Deadenylation. Methods in Molecular Biology, vol 2723. Humana New York, NY., 2024. | DOI : doi: 10.1007/978-1-0716-3481-3_14

• POUCLET A., PFLIEGER D., MERRET R., CARPENTIER M.C., SCHIAFFINI M., ZUBER H., GAGLIARDI D. and GARCIA D.

  Multi-transcriptomics identifies targets of the endoribonuclease DNE1 and highlights its coordination with decapping

  Plant Cell, 3674–3688, 2024. | DOI : https://doi.org/10.1093/plcell/koae175

• SIRLIN-JOSSERAND M., ACHARD L., PFLIEGER D., DAVIÈRE J.M. and ACHARD P.

  NPF4.1 imports embryo-derived GA4 to the endosperm to promote seed germination

  BioRxiv, 1, 2024. | DOI : https://doi.org/10.1101/2024.10.07.617022

• ELSER D., PFLIEGER D., VILLETTE C., MOEGLE B., MIESCH L. and GAQUEREL E.

  Evolutionary metabolomics of specialized metabolism diversification in the genus Nicotiana highlights N-acylnornicotine innovations

  Science Advances, 9(34), 2023. | DOI : 10.1126/sciadv.ade8984

• COGNAT V., PAWLAK G., PFLIEGER D. and MARÉCHAL-DROUARD L.

  PlantRNA 2.0: an updated database dedicated to tRNAs of photosynthetic eukaryotes

  Plant Journal, 112:1112-1119, 2022. | DOI : 10.1111/tpj.15997

• ELSER D., PFLIEGER D., VILLETTE C., MOEGLE B., MIESCH L. and GAQUEREL E.

  Evolutionary metabolomics of specialized metabolism diversification in the genus Nicotiana highlights allopolyploidy-mediated innovations in N-acylnornicotine metabolism

  Science Advances, , 2022.

• SCHEER H., DE ALMEIDA C., FERRIER E., SIMONNOT Q., POIRIER L., PFLIEGER D., SEMENT F., KOECHLER S., PIERMARIA C., KRAWCZYK P., MROCZEK S., CHICHER J., KUHN L., DZIEMBOWSKI A., HAMMANN P., ZUBER H. and GAGLIARDI D.

  The TUTase URT1 connects decapping activators and prevents the accumulation of excessively deadenylated mRNAs to avoid siRNA biogenesis

  Nature Communications, 12:1298, 2021. | DOI : 10.1038/s41467-021-21382-2

• BÖHRER M., RYMEN B., HIMBER C., GERBAUD A., PFLIEGER D., LAUDENCIA-CHINGCUANCO D., CARTWRIGHT A., VOGEL J., SIBOUT R. and BLEVINS T.

  Integrated genome-scale analysis and northern blot detection of retrotransposon siRNAs across plant species

  In: Heinlein M. (ed) RNA tagging. Methods in Molecular Biology, vol 2166. Humana New York, NY., 2020. | DOI : 10.1007/978-1-0716-0712-1_23

• PITZALIS N., AMARI K., GRAINDORGE S., PFLIEGER D., DONAIRE L., WASSENEGGER M., LLAVE C. and HEINLEIN M.

  Turnip mosaic virus in oilseed rape activates networks of sRNA-mediated interactions between viral and host genomes

  Communications Biology, 3:702, 2020. | DOI : 10.1038/s42003-020-01425-y

• HUMMEL G., BERR A., GRAINDORGE S., COGNAT V., UBRIG E., PFLIEGER D., MOLINIER J. and MARÉCHAL-DROUARD L.

  Epigenetic silencing of clustered tDNAs in Arabidopsis

  Nucleic Acids Research, 48:10297-10312, 2020. | DOI : 10.1093/nar/gkaa766

• LANGE H., NDECKY S., GOMEZ-DIAZ C., PFLIEGER D., BUTEL N., ZUMSTEG J., KUHN L., PIERMARIA C., CHICHER J., CHRISTIE M., KARAASLAN E.S., LANG P.L., WEIGEL D., VAUCHERET H., HAMMANN P. and GAGLIARDI D.

  RST1 and RIPR connect the cytosolic RNA exosome to the Ski complex in Arabidopsis

  Nature Communications, 10:3871, 2019. | DOI : 10.1038/s41467-019-11807-4