Publications

TROMOTER N., CICHOCKI B., CHEVALIER Q., PÉCOURNEAU J., STRUB J.M., HEMMERLIN A., SPECHT A., DAVIOUD-CHARVET E. and ELHABIRI M.

Synthesis and photochemical properties of fluorescent metabolites generated from fluorinated benzoylmenadiones in living cells

The Journal of Organic Chemistry, 89(4):2104-2126, 2024. | DOI : 10.1021/acs.joc.3c00620

ZHOU N., LI C., XIE W., LIANG N., WANG J., WANG B., WU J., SHEN W.H., LIU B. and DONG A.

Histone methylation readers MRG1/2 interact with PIF4 to promote thermomorphogenesis in Arabidopsis

Cell Reports, 43:113726, 2024. | DOI : 10.1016/j.celrep.2024.113726

RUFFENACH L., HEINTZ D., VILLETTE C., COSENTINO C., FUNFSCHILLING D., BODIN F., BAHLOULI N. and CHATELIN S.

Ultrasonic elastography for the prevention of breast implant rupture: Detection of an increase with stiffness over implantation time

Journal of Biomechanics, 163:1-7, 2024. | DOI : https://doi.org/10.1016/j.jbiomech.2024.111955

GIRAUDO P., SIMONNOT Q., PFLIEGER D., PETER J., GAGLIARDI D. and ZUBER H.

Nano3'RACE: A Method to Analyze Poly(A) Tail Length and Nucleotide Additions at the 3' Extremity of Selected mRNAs Using Nanopore Sequencing.

In: Eugene Valkov, Aaron C. Goldstrohm (eds) Deadenylation. Methods in Molecular Biology, vol 2723. Humana New York, NY., 2024. | DOI : doi: 10.1007/978-1-0716-3481-3_14

THIEME M., MINADAKIS N., HIMBER C., KELLER B., XU W., RUTOWICZ K., MATTEOLI C., BÖHRER M., RYMEN B., LAUDENCIA-CHINGCUANCO D., VOGEL J., SIBOUT R., STRITT C., BLEVINS T. and ROULIN A.C.

Transposition of HOPPLA in siRNA-deficient plants suggests a limited effect of the environment on retrotransposon mobility in Brachypodium distachyon

PLoS Genetics, 20(3):e1011200, 2024. | DOI : 10.1371/journal.pgen.1011200

HEINLEIN M.

Thomas Hohn (1938-2023)

Virologie, , 2024. | DOI : 10.1684/vir.2024.1044

HEINLEIN M.

Thomas Hohn (1938-2023) [french]

Virologie, , 2024. | DOI : 10.1684/vir.2024.1043

CHEVALIER Q., HUCHELMANN A., DEBIE P., MERCIER P., HARTMANN M., VONTHRON-SENECHEAU C., BACH T.J., SCHALLER H. and HEMMERLIN A.

Methyl-Jasmonate Functions as a Molecular Switch Promoting Cross-Talk between Pathways for the Biosynthesis of Isoprenoid Backbones Used to Modify Proteins in Plants

Plants, 13(8):1110, 2024. | DOI : 10.3390/plants13081110

SHI B., FELIPO BENAVENT A., CERUTTI G., GALVAN-AMPUDIA C., JILLI L., BRUNOUD G., MUTTERER J., VALLET E., ACHARD L., DAVIÈRE J.M., NAVARRO-GALIANAO A., WALIA A., LAZARY S., LEGRAND J., WEINSTAIN R., JONES A.M., PRAT S., ACHARD P. and VERNOUX T.

A quantitative gibberellin signaling biosensor reveals a role for gibberellins in internode specification at the shoot apical meristem

Nature Communications, 3895:3895, 2024. | DOI : doi: 10.1038/s41467-024-48116-4.

POUCLET A., PFLIEGER D., MERRET R., CARPENTIER M.C., SCHIAFFINI M., ZUBER H., GAGLIARDI D. and GARCIA D.

Multi-transcriptomics identifies targets of the endoribonuclease DNE1 and highlights its coordination with decapping

Plant Cell, 3674–3688, 2024. | DOI : https://doi.org/10.1093/plcell/koae175

KNOSP S., KRIEGSHAUSER L., TATSUMI K., MALHERBE L., ERHARDT M., WIEDEMANN G., BAKAN B., KOHCHI T., RESKI R. and RENAULT H.

An ancient role for CYP73 monooxygenases in phenylpropanoid biosynthesis and embryophyte development

EMBO Journal, 43:4092-4109, 2024. | DOI : https://doi.org/10.1038/s44318-024-00181-7

ROTT M.E., GHOSHAL K., LERAT S., BROSSEAU C., CLÉMENT G., PHELAN J., POOJARI S., GAAFAR Y., VEMULAPATI B.M., SCHEER H., RITZENTHALER C., FALL M.L. and MOFFET P.

Improving grapevine virus diagnostics: Comparative analysis of three dsRNA enrichment methods for high-throughput sequencing

Journal of Virological Methods, 329:114997, 2024. | DOI : https://doi.org/10.1016/j.jviromet.2024.114997

KASSEM R., COUSIN A., CLESSE D., POIGNAVENT V., TROLET A., RITZENTHALER C., MICHON T., CHOVIN A. and DEMAILLE C.

Nanobody-guided redox and enzymatic functionalization of icosahedral virus particles for enhanced bioelectrocatalysis

Bioelectrochemistry, 155, 2024. | DOI : https://doi.org/10.1016/j.bioelechem.2023.108570

ZHENG Y., MOORLACH B., JAKOBS-SCHÖNWANDT D., PATEL A., PASTACALDI C., JACOB S., SEDE A.R., HEINLEIN M., PORANEN M.M., KOGEL K.H. and LADERA-CARMONA M.

Exogenous dsRNA-Mediated Control of Rice Blast Fungus Involves Sequence-Specific RNAi and Sequence-Unspecific Fungal Stress Responses

Research Square, , 2024. | DOI : 10.21203/rs.3.rs-4538504/v1

OHTA D., FUWA A., YAMAROKU Y., ISOBE K., NAKAMOTO M., OKAZAWA A., OGAWA T., EBINE K., UEDA T., MERCIER P. and SCHALLER H.

Characterization of Subcellular Dynamics of Sterol Methyltransferases Clarifies Defective Cell Division in smt2 smt3, a C-24 Ethyl Sterol-Deficient Mutant of Arabidopsis

Biomolecules, 14:868, 2024. | DOI : 10.3390/biom14070868

WERCK D., NELSON D.R. and RENAULT H.

Cytochromes P450 evolution in the plant terrestrialization context

Philosophical Transactions of the Royal Society B: Biological Sciences, 379(1914):20230363, 2024. | DOI : 10.1098/rstb.2023.0363

JOHANN TO BERENS P., PETER J., KOECHLER S., BRUGGEMAN M., STAERCK S. and MOLINIER J.

The histone demethylase JMJ27 acts during the UV-induced modulation of H3K9me2 landscape and facilitates photodamage repair

Nature Plants, 10:1698–1709, 2024. | DOI : 10.1038/s41477-024-01814-9

KAABECHE M., CHARRETON M., KADALA A., MUTTERER J., CHARNET P. and COLLET C.

Cardiotoxicity of the diamide insecticide chlorantraniliprole in the intact heart and in isolated cardiomyocytes from the honey bee

Scientific Reports, 14(1), 2024. | DOI : 10.1038/s41598-024-65007-2

LI X., USLU V.V., YING C., HAN X., BERR A., ZHANG W. and DONG Y.

Specific chromatin states and m6A modifications are associated with mRNA mobility in planta

Horticulture Research, , 2024. | DOI : 10.1093/hr/uhae101

BURKE N., MÜLLER G., SAGGIOMO V., HASSETT A.R., MUTTERER J., Ó SÚILLEABHÁIN P., ZAKHAROV D., REYNAUD E.G. and PICKERING M.

EnderScope: a low-cost 3D printer-based scanning microscope for microplastic detection

Philosophical Transactions of the Royal Society A, 382(20230214), 2024. | DOI : 10.1098/rsta.2023.0214

SIRLIN-JOSSERAND M., ACHARD L., PFLIEGER D., DAVIÈRE J.M. and ACHARD P.

NPF4.1 imports embryo-derived GA4 to the endosperm to promote seed germination

BioRxiv, 1, 2024. | DOI : https://doi.org/10.1101/2024.10.07.617022

BERRISSOU C., COGNAT V., KOECHLER S., BERGDOLL M., DUCHÊNE A.M. and MARÉCHAL-DROUARD L.

Extensive import of nuclear-encoded tRNAs into chloroplasts of the photosynthetic lycophyte, Selaginella kraussiana

Proceedings of the National Academy of Sciences of the United States of America, 121(46):00, 2024. | DOI : 10.1073/pnas.2412221121

RIGO R., ZUMSTEG J., SCHALLER H., BARCHIETTO T., BUCHET S., HEINTZ D. and VILLETTE C.

BW312 Hordeum vulgare semi ‑ dwarf mutant exhibits a shifted metabolic profile towards pathogen resistance

Metabolomics, 10, 2024. | DOI : 10.1007/s11306-024-02174-3

CHENG Q., ZENG Y., HUANG S., YANG C., XIE Y., SHEN W.H. and LI L.

PHYTOCHROME-INTERACTING FACTOR 7 and RELATIVE OF EARLY FLOWERING 6 act in shade avoidance memory in Arabidopsis

Nature Communications, 15, 2024. | DOI : 10.1038/s41467-024-51834-4

SALL S.O., ALIOUA A., STAERCK S., GRAINDORGE S., PELLICOLI M., SCHULER J., GALINDO C., RAFFY Q., ROUSSEAU M. and MOLINIER J.

Characterization of radiations-induced genomic structural variations in Arabidopsis thaliana

Plant Journal, 0, 2024. | DOI : 10.1111/tpj.17180

FELGINES L., RYMEN B., MARTINS L.M., XU G., MATTEOLI C., HIMBER C., ZHOU M., EIS J., CORUH C., BÖHRER M., KUHN L., CHICHER J., PANDEY V., HAMMANN P., WOHLSCHLEGEL J., WALTZ F., LAW J.A. and BLEVINS T.

CLSY docking to Pol IV requires a conserved domain critical for small RNA biogenesis and transposon silencing

Nature Communications, 15:10298, 2024. | DOI : 10.1038/s41467-024-54268-0

MOGHE G., KRUSE L., PETERSEN M., SCOSSA F., FERNIE A., GAQUEREL E. and D'AURIA J.

BAHD Company: The Ever-Expanding Roles of the BAHD Acyltransferase Gene Family in Plants

Annual Review of Plant Biology, 74:165-194, 2023. | DOI : doi: 10.1146/annurev-arplant-062922-050122

POUCLET A., GAGLIARDI D. and GARCIA D.

No-go decay as a novel route to restrict viral infection in plants

Molecular Plant, NA, 2023. | DOI : https://doi.org/10.1016/j.molp.2023.02.001

YANG C., ZHU T., ZHOU N., HUANG S., ZENG Y., JIANG W., XIE Y., SHEN W.H. and LI L.

PIF7-mediated epigenetic reprogramming promotes the transcriptional response to shade in Arabidopsis

EMBO Journal, 42:e111472, 2023. | DOI : 10.15252/embj.2022111472

WANG S., DUAN X., WANG S., LI H., ZHANG Y., XU C., YU Y., XIANG L., JIANG F., HEINLEIN M., LI T. and ZHANG W.

A chaperonin containing T-complex polypeptide-1 facilitates the formation of the PbWoxT1-PbPTB3 ribonucleoprotein complex for long-distance RNA trafficking in Pyrus betulaefolia

New Phytologist, 238(3):1115-1128, 2023. | DOI : 10.1111/nph.18789

HOLMES A.D., CHAN P., CHEN Q., IVANOV P., MARÉCHAL-DROUARD L., POLACEK N., KAY M.A. and LOWE T.M.

A standardized ontology for naming tRNA-derived RNAs based on molecular origin

Nature Methods, 00, 2023. | DOI : doi:10.1038/s41592-023-01813-2

HAMEL P., SALINAS-GIEGÉ T., PRZYBYLA-TOSCANO J., CACCAMO A., SUBRAHMANIAN N., ROUHIER N., MARÉCHAL-DROUARD L., CARDOL P., GONZALES-HALPHEN D. and REMACLE C.

The mitochondrion: from genome to proteome

In: Arthur R. Grossman and Francis-André Wollman (ed) The Chlamydomonas Sourcebook, chapter 11. Academic Press., 2023.

DONG Y., USLU V.V., BERR A., SINGH G., PAPDI C., STEFFENS V., HEITZ T. and RYABOVA L.

TOR represses stress responses through global regulation of H3K27 trimethylation in plants

Journal of Experimental Botany, , 2023. | DOI : 10.1093/jxb/erac486

FAL K., BERR A., LE MASON M., FAIGENBOIM A., PANO E., ISHKHNELI N., MOYAL N.L., VILLETTE C., TOMKOVA D., CHABOUTÉ M.E., WILLIAMS L.E. and CARLES C.

Lysine 27 of histone H3.3 is a fine modulator of developmental gene expression and stands as an epigenetic checkpoint for lignin biosynthesis in Arabidopsis

New Phytologist, , 2023.

WU J., YANG Y., WANG J., WANG Y., YIN L., AN Z., DU K., ZHU Y., QI J., SHEN W.H. and DONG A.

Histone chaperones AtChz1A and AtChz1B are required for H2A.Z deposition and interact with the SWR1 chromatin-remodeling complex in Arabidopsis thaliana

New Phytologist, 239:189-207, 2023. | DOI : 10.1111/nph.18940

POSTEL Z., SLOAN D., GALLINA S., GODÉ C., SCHMITT E., MANGENOT S., MARÉCHAL-DROUARD L., VARRÉ J.S. and TOUZET P.

The decoupled evolution of the organellar genomes of Silene nutans leads to distinct roles in the speciation process

New Phytologist, 00, 2023. | DOI : 10.1111/nph.18966

SUNTICHAIKAMOLKUL N., AKASHI T., MAHALAPBUTR P., SANACHAI K., RUNGROTMONGKOL T., BASSARD J.E., SCHALLER H., DE-EKNAMKUL W., VIMOLMANGKANG S., YAMAZAKI M. and SIRIKANTARAMAS S.

Daidzein Hydroxylation by CYP81E63 is involved in the Biosynthesis of Miroestrol in Pueraria mirifica

Plant and Cell Physiology, 64(1):64–79, 2023. | DOI : https://doi.org/10.1093/pcp/pcac140

KUHN L., VINCENT T., HAMMANN P. and ZUBER H.

Exploring Protein Interactome Data with IPinquiry: Statistical Analysis and Data Visualization by Spectral Counts

In: Thomas Burger (ed) Statistical Analysis of Proteomic Data.. Methods in Molecular Biology, vol 2426. Thomas Burger Exploring the Dynamics of Proteomes, Proteomics French Infrastructure, Université Grenoble Alpes, CNRS, CEA, INSERM, Grenoble, France., 2023. | DOI : https://doi.org/10.1007/978-1-0716-1967-4_11

BINENBAUM J., WULFF N., CAMUT L., KIRADJIEV K., ANFANG M., TAL I., VASUKI H., ZHANG Y., ACHARD L., DAVIÈRE J.M., RIPPER D., CARRERA E., MANASHEROVA E., YAAKOV S.B., LAZARY S., HUA C., NOVAK V., CROCOLL C., WEINSTAIN R., COHEN H., RAGNI L., AHARONI A., BAND L.R., ACHARD P., NOUR-ELDIN H.H. and SHANI E.

Gibberellin and abscisic acid transporters facilitate endodermal suberin formation in Arabidopsis

Nature Plants, 785-802, 2023. | DOI : doi: 10.1038/s41477-023-01391-3

DUPOUY G., DONG Y., HERZOG E., CHABOUTÉ M.E. and BERR A.

Nuclear envelope dynamics in connection to chromatin remodeling.

Plant Journal, , 2023.

CONART C., BOMZAN D.P., HUANG X.Q., BASSARD J.E., PARAMITA S., SAINT-MARCOUX D., RIUS-BONY A., HIVERT G., ANCHISI A., SCHALLER H., HAMAMA L., MAGNARD J.L., LIPKO A., SWIEZEWSKA E., JAME P., RIVEILL G., HIBRAND-SAINT OYANT L., ROHMER M., LEWINSOHN E., DUDAREVA N., BAUDINO S., CAISSARD J.C. and BOACHON B.

A cytosolic bifunctional geranyl/farnesyl diphosphate synthase provides MVA-derived GPP for geraniol biosynthesis in rose flowers

Proceedings of the National Academy of Sciences of the United States of America, 120(19):1-12, 2023. | DOI : 10.1073/pnas.2221440120

JOHANN TO BERENS P., GOLEBIEWSKA K., PETER J., STAERCK S. and MOLINIER J.

UV-B-induced modulation of constitutive heterochromatin content in Arabidopsis thaliana

Photochemical & Photobiological Sciences, 22(9):2153-2166, 2023. | DOI : 10.1007/s43630-023-00438-w

STITZ M., KUSTER D., REINERT M., SCHEPETILNIKOV M., BERTHET B., REYES-HERNÁNDEZ J., JANOCHA D., ARTINS A., BOIX M., HENRIQUES R., PFEIFFER A., LOHMANN J., GAQUEREL E. and MAIZEL A.

TOR acts as metabolic gatekeeper for auxin-dependent lateral root initiation in Arabidopsis thaliana

EMBO Journal, 42(10):e111273, 2023. | DOI : doi: 10.15252/embj.2022111273.

JOLY A.C., GARCIA S., HILY J.M., KOECHLER S., DEMANGEAT G., GARCIA D., VIGNE E., LEMAIRE O., ZUBER H. and GAGLIARDI D.

An extensive survey of phytoviral RNA 3' uridylation identifies extreme variations and virus-specific patterns

Plant Physiology, kiad278, 2023. | DOI : 10.1093/plphys/kiad278

HUANG C., SEDE A.R., ELVIRA-GONZALEZ L.., YAN Y., RODRIGUEZ M., MUTTERER J., BOUTANT E., SHAN L. and HEINLEIN M.

dsRNA-induced immunity targets plasmodesmata and is suppressed by viral movement proteins

Plant Cell, 35(10):3845-3869, 2023. | DOI : 10.1093/plcell/koad176

HU R., LI X., HU Y., ZHANG R., LV Q., ZHANG M., SHENG X., ZHAO F., CHEN Z., DING Y., YUAN H., WU X., XING S., YAN X., BAO F., WAN P., XIAO L., WANG X., XIAO W., DECKER E.L., VAN GESSEL N., RENAULT H., WIEDEMANN G., HORST N.A., HAAS F.B., WILHELMSSON P.K., ULLRICH K.K., NEUMANN E., LV B., LIANG C., DU H., LU H., GAO Q., CHENG Z., YOU H., XIN P., CHU J., HUANG C.H., LIU Y., DONG S., ZHANG L., CHEN F., DENG L., DUAN F., ZHAO W., LI K., LI Z., LI X., CUI H., ZHANG Y.E., MA C., ZHU R., JIA Y., WANG M., HASEBE M., FU J., GOFFINET B., MA H., RENSING S.A., RESKI R. and HE Y.

Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet

Cell, 186(17):3558-3576, 2023. | DOI : 10.1016/j.cell.2023.07.003

VILLETTE C., MAURER L., ZUMSTEG J., MUTTERER J., WANKO A. and HEINTZ D.

Mass spectrometry imaging for biosolids characterization to assess ecological or health risks before reuse

Nature Communications, 4244, 2023. | DOI : https://doi.org/10.1038/s41467-023-40051-0

ELSER D., PFLIEGER D., VILLETTE C., MOEGLE B., MIESCH L. and GAQUEREL E.

Evolutionary metabolomics of specialized metabolism diversification in the genus Nicotiana highlights N-acylnornicotine innovations

Science Advances, 9(34), 2023. | DOI : 10.1126/sciadv.ade8984

PEREIRA D., ALLINE T., SINGH G., CHABOUTÉ M.E. and ASNACIOS A.

A Microfluidic-Like System (MLS) to Grow, Image, and Quantitatively Characterize Rigidity Sensing by Plant's Roots and Root Hair Cells

In: Ronen Zaidel-Bar (ed) Methods Mol Biol, chapter 8. John M. Walker., 2023.

KAIROUANI A., PONTIER D., PICART C., MOUNET F., MARTINEZ Y., LE-BOT L., FANUEL M., HAMMANN P., BELMUDES L., MERRET R., AZEVEDO J., CARPENTIER M.C., GAGLIARDI D., COUTÉ Y., SIBOUT R., BIES-ETHEVE N. and LAGRANGE T.

Cell-type-specific control of secondary cell wall formation by Musashi-type translational regulators in Arabidopsis

eLife, 12:RP88207, 2023. | DOI : 10.7554/eLife.88207

DONG Y. and RYABOVA L.

Do plants drive translation reinitiation to dodge nonsense-mediated decay?

Journal of Experimental Botany, 5, 2023. | DOI : 10.1093/jxb/erac444

DONG Y., SROUR O., LUKHOVITSKAYA N., MAKARIAN J., BAUMBERGER N., GALZITSKAYA O., ELSER D., SHCHEPETILNIKOV M. and RYABOVA L.

Functional analogs of mammalian 4E-BPs reveal a role for TOR in global plant translation

Cell Reports, 21, 2023.

ZUMSTEG J., HIRSCHLER A., CARAPITO C., MAURER L., VILLETTE C., HEINTZ D., DAHL C., EL NAYAL A., SANGAL V., MAHMOUD H., VAN DORSSELAER A. and ISMAIL W.

Mechanistic insights into sulfur source-driven physiological responses and metabolic reorganization in the fuel-biodesulfurizing Rhodococcus qingshengii IGTS8

Applied and Environmental Microbiology, 89:1, 2023. | DOI : https://doi.org/10.1128/aem.00826-23

NOIR S. and GENSCHIK P.

Distinct roles of Arabidopsis ORC1 proteins in DNA replication and heterochromatic H3K27me1 deposition

Nature Communications, 1270, 2023.

KRIEGER C., HALTER D., BALTENWECK R., COGNAT V., BOISSINOT S., MAIA-GRONDARD A., ERDINGER M., BOGAERT F., PICHON E., HUGUENEY P., BRAULT V. and ZIEGLER-GRAFF V.

An aphid-transmitted virus reduces the host plant response to its vector to promote its transmission

Phytopathology, 113(9):1745-1760, 2023. | DOI : 10.1094/PHYTO-12-22-0454-FI

CHERY M., BERRISSOU C., HUMBERT N., HUMMEL G., MÉLY Y., SALINAS-GIEGÉ T. and MARÉCHAL-DROUARD L.

The Arabidopsis tDR Ala forms G-quadruplex structures that can be unwound by the DExH1 DEA(D/H)-box RNA helicase

Plant Journal, 118:124-140, 2023. | DOI : doi.org/10.1111/tpj.16596

ZUMSTEG J., BOSSARD E., GOURGUILLON L., VILLETTE C. and HEINTZ D.

Comparison of nocturnal and diurnal metabolomes of rose flowers and leaves

Metabolomics, 1-12, 2023. | DOI : https://doi.org/10.1007/s11306-023-02063-1

ARRIVÉ M., BRUGGEMAN M., SKALTSOGIANNIS V., COUDRAY L., QUAN Y.F.P., SCHELCHER C., COGNAT V., HAMMANN P., CHICHER J., WOLFF P., GOBERT A. and GIEGÉ P.

A tRNA modifying enzyme facilitates RNase P activity in Arabidopsis nuclei.

Nature Plants, 9, 2031-2041, 2023.

HUANG C., SEDE A.R., ELVIRA-GONZALEZ L.., YAN Y., RODRIGUEZ M., MUTTERER J., BOUTANT E., SHAN L. and HEINLEIN M.

dsRNA-induced immunity targets plasmodesmata and is suppressed by viral movement proteins

Plant Cell, , 2023. | DOI : 10.1101/2022.11.21.517408

CHEN K., LIU H., BLEVINS T., HAO J. and OTTEN L.

Extensive natural Agrobacterium-induced transformation in the genus Camellia

Planta, 258(4), 2023. | DOI : 10.1007/s00425-023-04234-9

ARSÈNE-PLOETZE F., ROMPAIS M., ALIOUA A., COGNAT V., ERHARDT M., GRAINDORGE S., KOECHLER S., MUTTERER J., CARAPITO C. and SCHALLER H.

Streptomyces cocklensis DSM 42063 and Actinacidiphila bryophytorum DSM 42138 colonize Arabidopsis thaliana and modulate its proteome

Phytofrontiers, , 2023. | DOI : doi.org/10.1094/PHYTOFR-12-22-0149-R

HEMMERLIN A.

Phosphorylation of Metabolites Involved in Salvage Pathways for Isoprenoid Biosynthesis in Plants

Kinases and Phosphatases, 1(3):151-166, 2023. | DOI : 10.3390/kinasesphosphatases1030010

ALIOUA A. and HEITZLER P.

On the origin of the cultivated roses: DNA authentication of the Bourbon rose founding pedigree.

International Journal of Plant Biology, 14:1117-1130, 2023. | DOI : doi.org/10.3390/ijpb14040082

GUINGAND A., TROLET A., DANIEL D., WAGNER R., FLACHER V., RITZENTHALER C., POIGNAVENT V. and DUMORTIER H.

A plant-derived Virus Like Particle versatile platform for specific antigen-delivery to dendritic cells: towards the development of an innovative anti-tumor vaccine

European Journal of Immunology, 53 (Suppl. 2), 2023. | DOI : DOI: 10.1002/eji.202370300

WERCK D.

Promiscuity, a driver of of plant cytochrome P450 evolution?

Biomolecules, 13(394), 2023. | DOI : doi.org/10.3390/biom13020394

GUZMÁN-BENITO I., ROBINSON C., HUA C., SEDE A.R., ELVIRA-GONZALEZ L.., PUNZÓN I., HEINLEIN M., NÜRNBERGER T. and LLAVE C.

The receptor-like kinase BIR1 inhibits elicitor-induced plasmodesmata callose deposition and PTI gene expression and requires EDS1 and SOBIR1 to cause dose-dependent cell-death in Arabidopsis

BioRxiv, , 2023. | DOI : 10.1101/2023.06.23.546234

KNOSP S., KRIEGSHAUSER L., TATSUMI K., MALHERBE L., GERTRUD W., BAKAN B., KOHCHI T., RESKI R. and RENAULT H.

An ancient role for the CYP73 gene family in t-cinnamic acid 4-hydroxylation, phenylpropanoid biosynthesis and embryophyte development

BioRxiv, , 2023. | DOI : 10.1101/2023.08.20.551634

ELSER D., HUBER F. and GAQUEREL E.

Mass2SMILES: deep learning based fast prediction of structures and functional groups directly from high-resolution MS/MS spectra.

BioRxiv, , 2023. | DOI : 10.1101/2023.07.06.547963

BLAGOJEVIC A., SCHIAFFINI M., LECHNER E., BAUMBERGER N., GARCIA D. and GENSCHIK P.

Arabidopsis AGO1 N-terminal Poly-Q domain promotes phase separation and association with stress granules during heat stress

BioRxiv, nd, 2023. | DOI : bioRxiv: 2023.10.12.562039

HOSSAIN M., PFAFENROTH C., IMANI J., SECIC E., SEDE A.R., GALLI M., HEINLEIN M., BINDEREIF A., LADERA M. and KOGEL K.H.

Designer antisense circRNAGFP reduces GFP protein abundance in transgenic Arabidopsis protoplasts in a sequence-specific manner, independent of RNAi pathways

BioRxiv, , 2023. | DOI : 10.1101/2023.11.20.567890

LANGE H. and GAGLIARDI D.

Catalytic activities, molecular connections, and biological functions of plant RNA exosome complexes

Plant Cell, 34(3):967–988, 2022. | DOI : 10.1093/plcell/koab310

KANG H., LIU Y., FAN T., MA J., WU D., HEITZ T., SHEN W.H. and ZHU Y.

Arabidopsis CHROMATIN REMODELING 19 acts as a transcriptional repressor and contributes to plant pathogen resistance

Plant Cell, 34:1100-1116, 2022. | DOI : 10.1093/plcell/koab318

SINGH G., BATZENSCHLAGER M., TOMKOVA D., HERZOG E., HOFFMANN E., HOULNÉ G., SCHMIT A.C., BERR A. and CHABOUTÉ M.E.

GIP1 and GIP2 contribute to the maintenance of genome stability at the nuclear periphery

Frontiers in Plant Science, 12:804928, 2022. | DOI : 10.3389/fpls.2021.804928

HEMONO M., HALLER A., CHICHER J., DUCHÊNE A.M. and NGONDO P.

The interactome of CLUH reveals its association to SPAG5 and its co- translational proximity to mitochondrial proteins

BMC Biology, 20(13), 2022. | DOI : 10.1186/s12915-021-01213-y

SCHIAFFINI M., CHICOIS C., POUCLET A., CHARTIER T., UBRIG E., GOBERT A., ZUBER H., MUTTERER J., CHICHER J., KUHN L., HAMMANN P., GAGLIARDI D. and GARCIA D.

A NYN domain protein directly interacts with DECAPPING1 and is required for phyllotactic pattern

Plant Physiology, 188(2):1174–1188, 2022. | DOI : 10.1093/plphys/kiab529

BAI Y., YANG C., HALTISCHKE R., PAETZ C., KESSLER D., BURKARD K., GAQUEREL E., BALDWIN I.T. and LI D.

Natural history-guided omics reveals plant defensive chemistry against leafhopper pests

Science, 375(6580), 2022. | DOI : doi: 10.1126/science.abm2948.

BENITEZ-ALFONSO Y. and HEINLEIN M.

Plasmodesmata - Methods and Protocols, 2nd edition

Methods in Molecular Biology, Humana Press, New York, , 2022.

HUANG C. and HEINLEIN M.

Function of plasmodesmata in the interaction of plants with microbes and viruses

Methods in Molecular Biology, 2457:23-54, 2022. | DOI : 10.1007/978-1-0716-2132-5_2

HUANG C., MUTTERER J. and HEINLEIN M.

In vivo aniline blue staining and semi-automated quantification of callose deposition at plasmodesmata

Methods in Molecular Biology, 2457:151-165, 2022. | DOI : 10.1007/978-1-0716-2132-5_9

LAZAREVA E., ATABEKOVA A.K., LEZZHOV A.A., MOROZOV S.Y., HEINLEIN M. and SOLOVYEV A.G.

Virus genome-based reporter for analyzing viral movement proteins and plasmodesmata permeability

Methods in Molecular Biology, 2457:333-349, 2022. | DOI : 10.1007/978-1-0716-2132-5_23

PEÑA E.J. and HEINLEIN M.

In vivo visualization of mobile mRNA particles in plants using BglG

Methods in Molecular Biology, 2457:411-426, 2022. | DOI : 10.1007/978-1-0716-2132-5_28

BURCH-SMITH T.M., HEINLEIN M. and LEE J.Y.

Editorial on the Research Topic Plasmodesmata: Recent Progress and New Insights

Frontiers in Plant Science, 13, 2022. | DOI : 10.3389/fpls.2022.840821

CHEVIGNY N., LOTFI F., LE BLEVENEC A., NADIRAS C., FERTET A., BICHARA M., ERHARDT M., DIETRICH A., RAYNAUD C. and GUALBERTO J.M.

RADA-dependent branch migration has a predominant role in plant mitochondria and its defect leads to mtDNA instability and cell cycle arrest

PLoS Genetics, e1010202, 2022. | DOI : 10.1371/journal.pgen.1010202

WANG B., LUO Q., LI Y., DU K., WU Z., LI T., SHEN W.H., HUANG C.H., GAN J. and DONG A.

Structural insights into partner selection for MYB and bHLH transcription factor complexes

Nature Plants, 8:1108-1117, 2022. | DOI : 10.1038/s41477-022-01223-w

SALL S.O., JOHANN TO BERENS P. and MOLINIER J.

DNA damage and DNA methylation

In: Miriam Galvonas Jasiulionis (ed) Epigenetics and DNA Damage, vol 33. Elsevier., 2022.

KANG H., FAN T., WU J., ZHU Y. and SHEN W.H.

Histone modification and chromatin remodeling in plant response to pathogens

Frontiers in Plant Science, 13:986940, 2022. | DOI : 10.3389/fpls.2022.986940

LUO Q., MO J., CHEN H., HU Z., WU B., WU J., LIANG Z., XIE W., DU K., PENG M., LI Y., LI T., ZHANG Y., SHI X., SHEN W.H., SHI Y., DONG A., WANG H. and MA J.

Structural insights into molecular mechanism for N6-adenosine methylation by MT-A70 family methyltransferase METTL4

Nature Communications, 13:5636, 2022. | DOI : 10.1038/s41467-022-33277-x

GRAINDORGE S., VILLETTE C., KOECHLER S., GROH C., COMTET-MARRE S., MERCIER P., MAGERAND R., PEYRET P., HEINTZ D., SCHALLER H. and ARSÈNE-PLOETZE F.

The Arabidopsis thaliana–Streptomyces Interaction Is Controlled by the Metabolic Status of the Holobiont

International Journal of Molecular Sciences, 23:12952, 2022.

HEMONO M., SALINAS-GIEGÉ T., ROIGNANT J., VINGADASSALON A., HAMMANN P., UBRIG E., NGONDO P. and DUCHÊNE A.M.

FRIENDLY (FMT) is an RNA binding protein associated with cytosolic ribosomes at the mitochondrial surface

Plant Journal, Online ahead of print, 2022. | DOI : 10.1111/tpj.15962

COGNAT V., PAWLAK G., PFLIEGER D. and MARÉCHAL-DROUARD L.

PlantRNA 2.0: an updated database dedicated to tRNAs of photosynthetic eukaryotes

Plant Journal, 112:1112-1119, 2022. | DOI : 10.1111/tpj.15997

WANG Z., OROSA-PUENTE B., NOMOTO M., GREY H., POTUSCHAK T., MATSUURA T., MORI I., TADA Y., GENSCHIK P. and SPOEL S.H.

Proteasome-associated ubiquitin ligase relays target plant hormone-specific transcriptional activators

Science Advances, eabn4466, 2022. | DOI : 10.1126/sciadv.abn4466

HACQUARD T., CLAVEL M., BALDRICH P., LECHNER E., PÉREZ-SALAMÓ I., SCHEPETILNIKOV M., DERRIEN B., DUBOIS M., HAMMANN P., KUHN L., BRUN D., BOUTEILLER N., BAUMBERGER N., VAUCHERET H., MEYERS B.C. and GENSCHIK P.

The Arabidopsis F-box protein FBW2 targets AGO1 for degradation to avoid spurious loading of illegitimate small RNA

Cell Reports, 110671, 2022. | DOI : 10.1016/j.celrep.2022.110671

HOUNGUÈ U., VILLETTE C., TOKOUDAGBA J.M., CHACKER A.B., REMILA L., AUGER C., HEINTZ D., GBAGUIDI F.A. and SCHINI-KERTH V.B.

Carissa edulis Vahl (Apocynaceae) extract, a medicinal plant of Benin pharmacopoeia, induces potent endothelium-dependent relaxation of coronary artery rings involving nitric oxide

Phytomedicine, 154370, 2022. | DOI : https://doi.org/10.1016/j.phymed.2022.154370

JOHANN TO BERENS P., SCHIVRE G., THEUNE M., PETER J., SALL S.O., MUTTERER J., BARNECHE F., BOURBOUSSE C. and MOLINIER J.

Advanced image analysis methods for automated segmentation of subnuclear chromatin domains

Epigenomes, 6(4):34-40, 2022. | DOI : 10.3390/epigenomes6040034

DECROËS A., MAHILLON M., GENARD M., LIENARD C., LIMA-MENDEZ G., GILMER D., BRAGARD C. and LEGRÈVE A.

Rhizomania: Hide and Seek of Polymyxa betae and the Beet Necrotic Yellow Vein Virus with Beta vulgaris

Molecular Plant-Microbe Interactions, 35(11):989-1005, 2022. | DOI : 10.1094/mpmi-03-22-0063-r

CHERY M. and MARÉCHAL-DROUARD L.

Plant tRNA functions beyond their major role in translation

Journal of Experimental Botany, 00, 2022. | DOI : 10.1093/jxb/erac483

ATABEKOVA A.K., LAZAREVA E., LEZZHOV A.A., SOLOVIEVA A.D., GOLYSHEV S.A., SKULACHEV B.I., SOLOVYEV I.D., SAVITSKY A.P., HEINLEIN M., MOROZOV S.Y. and SOLOVYEV A.G.

Interaction between Movement Proteins of Hibiscus green spot virus

Viruses, 14(12):2742, 2022. | DOI : 10.3390/v14122742

MOEGLE B., HOURTOULE M., GOMMENGINGER C., BELABBES A., VILLETTE C., ELSER D., GAQUEREL E., NAVROT N. and MIESCH L.

Synthesis of Non-natural Aza-Iridoids via Ynamides and Molecular Networking-Based Tracing of Their In Planta Bioconversion

The Journal of Organic Chemistry, 1, 2022.

GRÉAU L., BLAUDEZ D., HEINTZ D., ZUMSTEG J., BILLET D. and CEBRON A.

Response of Poplar and Associated Fungal Endophytic Communities to a PAH Contamination Gradient

International Journal of Molecular Sciences, 23:5909, 2022. | DOI : https://doi.org/10.3390/ijms23115909

QUQUE M., BRUN C., VILLETTE C., SUEUR C., CRISCUOLO F., HEINTZ D. and BERTILE F.

Both age and social environment shape the phenotype of ant workers

Scientific Reports, 1, 2022. | DOI : https://doi.org/10.1038/s41598-022-26515-1

QUQUE M., VILLETTE C., CRISCUOLO F., SUEUR C., BERTILE F. and HEINTZ D.

Eusociality is linked to caste-specific differences in metabolism, immune system, and somatic maintenance-related processes in an ant species

Cellular and Molecular Life Sciences, 1, 2022. | DOI : https://doi.org/10.1007/s00018-021-04024-0

ZHANG K., SHI W., ZHENG X., WANG L., RIEMANN M., HEINTZ D. and NICK P.

A rice tubulin tyrosine ligase like 12 regulates phospholipase D activity and tubulin synthesis

Plant Science, 316:1, 2022. | DOI : https://doi.org/10.1016/j.plantsci.2021.111155

SCUTENAIRE J., PLASSARD D., MATELOT M., VILLA T., ZUMSTEG J., LIBRI D. and SÉRAPHIN B.

The S. cerevisiae m6A-reader Pho92 promotes timely meiotic recombination by controlling key methylated transcripts

Nucleic Acid Research, 51:517-535, 2022. | DOI : https://doi.org/10.1093/nar/gkac640

FORCISI S., MORITZ F., THOMPSON C.J., KANAWATI B., UHL J., AFONSO C., BADER C.D., BARSCH A., BOUGHTON B.A., CHU R.K., FEREY J., FERNANDEZ-LIMA F., GUÉGEN C., HEINTZ D., GOMEZ-HERNANDEZ M., JANG K.S., KESSLER N., MANGAL V., MÜLLER R., NAKABAYASHI R., NICOL E., NICOLARDI S., PALMBLAD M., PAŠA-TOLIĆ L., PORTER J., SCHMITZ-AFONSO I., SEO J.B., SOMMELLA E.M., VAN DER BURGT Y.E.M., VILLETTE C., WITT M., WITTRIG A., WOLFF J.J., EASTERLING M.L., LAUKIEN F.H. and SCHMITT-KOPPLIN P.

Large-Scale Interlaboratory DI-FT-ICR MS Comparability Study Employing Various Systems

Journal of the American Society for Mass Spectrometry, 2203-2214, 2022. | DOI : https://doi.org/10.1021/jasms.2c00082

SKALTSOGIANNIS V., CORRE N., WALTZ F. and GIEGÉ P.

Types and Functions of Mitoribosome-Specific Ribosomal Proteins across Eukaryotes.

International Journal of Molecular Sciences, 23, 3474, 2022.

CARTALAS J., COUDRAY L. and GOBERT A.

How RNases Shape Mitochondrial Transcriptomes.

International Journal of Molecular Sciences, 23, 6141, 2022.

ELSER D., PFLIEGER D., VILLETTE C., MOEGLE B., MIESCH L. and GAQUEREL E.

Evolutionary metabolomics of specialized metabolism diversification in the genus Nicotiana highlights allopolyploidy-mediated innovations in N-acylnornicotine metabolism

Science Advances, , 2022.

WARREN J., SALINAS-GIEGÉ T., HUMMEL G., COOTS N., SVENDSEN J., BROWN K., MARÉCHAL-DROUARD L. and SLOAN D.

Combining tRNA sequencing methods to characterize plant tRNA expression and post-transcriptional modification

RNA Biology, 18:64-78, 2021. | DOI : 0.1080/15476286.2020.1792089

KITTO R., DHILLON Y., BEVINGTON J., HORNE M., GIEGÉ P., MARÉCHAL-DROUARD L., HEINTZ D., VILLETTE C., CORRE N., ARRIVÉ M., MANEFIELD M., BOWMAN R., FAVIER J.J., OSBORNE B., WELCH C., MCKAY C. and HAMMOND M.

Synthetic biological circuit tested in spaceflight

Life Sciences in Space Research, 28:57-65, 2021. | DOI : 10.1016/j.lssr.2020.09.002

FIGON F., BALDWIN I.T. and GAQUEREL E.

Ethylene is a local modulator of jasmonate‐dependent phenolamide accumulation during Manduca sexta herbivory in Nicotiana attenuata

Plant Cell and Environment, , 2021. | DOI : 10.1111/pce.13955

MÉTEIGNIER L.V., GHANDOUR R., ZIMMERMANN A., KUHN L., MEURER J., ZOSCHKE R. and HAMMANI K.

Arabidopsis mTERF9 protein promotes chloroplast ribosomal assembly and translation by establishing ribonucleoprotein interactions in vivo

Nucleic Acids Research, 49:1114–1132, 2021. | DOI : 10.1093/nar/gkaa1244

FAL K., TOMKOVA D., VACHON G., CHABOUTÉ M.E., BERR A. and CARLES C.

Chromatin Manipulation and Editing: Challenges, New Technologies and Their Use in Plants

International Journal of Molecular Sciences, 22:512, 2021.

KRIEGSHAUSER L., KNOSP S., GRIENENBERGER E., TATSUMI K., GÜTLE D.D., ZUMSTEG J., RESKI R., ROSE J.K.C., WERCK D. and RENAULT H.

Function of the HYDROXYCINNAMOYL-CoA:SHIKIMATE HYDROXYCINNAMOYL TRANSFERASE is evolutionarily conserved in embryophytes

Plant Cell, 33(5):1472–1491, 2021. | DOI : 10.1093/plcell/koab044

CHEN K., DU K., SHI Y., YIN L., SHEN W.H., YU Y., LIU B. and DONG A.

H3K36 methyltransferase SDG708 enhances drought tolerance by promoting abscisic acid biosynthesis in rice

New Phytologist, 230:1967-1984, 2021. | DOI : 10.1111/nph.17290

GOBERT A., QUAN Y.F.P., ARRIVÉ M., WALTZ F., DA SILVA N., JOMAT L., COHEN M., JUPIN I. and GIEGÉ P.

Towards plant resistance to viruses using protein-only RNase P

Nature Communications, 12:1007, 2021. | DOI : https://doi.org/10.1038/s41467-021-21338-6

SCHEER H., DE ALMEIDA C., FERRIER E., SIMONNOT Q., POIRIER L., PFLIEGER D., SEMENT F., KOECHLER S., PIERMARIA C., KRAWCZYK P., MROCZEK S., CHICHER J., KUHN L., DZIEMBOWSKI A., HAMMANN P., ZUBER H. and GAGLIARDI D.

The TUTase URT1 connects decapping activators and prevents the accumulation of excessively deadenylated mRNAs to avoid siRNA biogenesis

Nature Communications, 12:1298, 2021. | DOI : 10.1038/s41467-021-21382-2

FAL K., KORSBO N., ALONSO-SERRA J., TELES J., LIU M., REFAHI Y., CHABOUTÉ M.E., JONSSON H. and HAMANT O.

Tissue folding at the organ-meristem boundary results in nuclear compression and chromatin compaction

Proceedings of the National Academy of Sciences of the United States of America, 118:e2017859118, 2021. | DOI : 10.1073/pnas.2017859118

SALINAS-GIEGÉ T., UBRIG E. and MARÉCHAL-DROUARD L.

Cyanophora paradoxa mitochondrial tRNAs play a double game

Plant Journal, 106(4):1105-1115, 2021. | DOI : 10.1111/tpj.15222

HEINLEIN M.

Movement of Viruses in Plants

In: Elsevier (ed) Enzyclopedia of Virology, Fourth Edition, chapter 3. Dennis Bamford and Mark Zuckerman Academic Press., 2021. | DOI : 10.1016/B978-0-12-809633-8.21258-2

AMARI K., HUANG C. and HEINLEIN M.

Potential impact of global warming on virus propagation in infected plants and agricultural productivity.

Frontiers in Plant Science, in press, 2021. | DOI : 10.3389/fpls.2021.649768

ANNACONDIA L.M., MARKOVIC D., REIG‐VALIENTE L.J., SKALTSOGIANNIS V., PIETERSE C.M.J., NINKOVIC V., SLOTKIN R.K. and MARTINEZ G.

Aphid feeding induces the relaxation of epigenetic control and the associated regulation of the defense response in Arabidopsis

New Phytologist, 1185-1200, 2021. | DOI : 10.1111/nph.17226

HEILING S., CORTES LLORCA L., LI J., GASE K., SCHMIDT A., SCHÄFER M., SCHNEIDER B., HALITSCHKE R., GAQUEREL E. and BALDWIN I.T.

Specific decorations of 17-hydroxygeranyllinalool diterpene glycosides solve the autotoxicity problem of chemical defense in Nicotiana attenuata

Plant Cell, , 2021. | DOI : 10.1093/plcell/koab048

LI D. and GAQUEREL E.

Next-Generation Mass Spectrometry Metabolomics Revives the Functional Analysis of Plant Metabolic Diversity

Annual Review of Plant Biology, 72, 2021. | DOI : 10.1146/annurev-arplant-071720-114836

VAN ZADELHOFF A., DE BRUIJN W.J.C., FANG Z., GAQUEREL E., ISHIHARA A., WERCK D., ZHANG P., ZHOU G., FRANSSEN M.C.R. and VINCKEN J.P.

Toward a Systematic Nomenclature for (Neo)Lignanamides

Journal of natural products, -, 2021. | DOI : doi: 10.1021/acs.jnatprod.0c00792

RAMOS-MORALES E., BAYAM E., DEL-POZO-RODRIGUEZ J., SALINAS-GIEGÉ T., MAREK M., TILLY P., WOLFF P., TROESCH E., ENNIFAR E., MARÉCHAL-DROUARD L., GODIN J.D. and ROMIER C.

The structure of the mouse ADAT2/ADAT3 complex reveals the molecular basis for mammalian tRNA wobble adenosine-to-inosine deamination

Nucleic Acids Research, 49(11):6529-6548, 2021. | DOI : https://doi.org/10.1093/nar/gkab436

DROZ B., DROUIN G., MAURER L., VILLETTE C., PAYRAUDEAU S. and IMFELD G.

Phase Transfer and Biodegradation of Pesticides in Water–Sediment Systems Explored by Compound-Specific Isotope Analysis and Conceptual Modeling

Environmental Science & Technology, 4720-4728, 2021. | DOI : https://doi.org/10.1021/acs.est.0c06283

MANCERA-MARTÍNEZ E., DONG Y., MAKARIAN J., SROUR O., THIÉBEAULD O., JAMSHEER M., CHICHER J., HAMMANN P., SCHEPETILNIKOV M. and RYABOVA L.

Phosphorylation of a reinitiation supporting protein, RISP, determines its function in translation reinitiation

Nucleic Acid Research, , 2021. | DOI : doi.org/10.1093/nar/gkab501

SCHATZ-DAAS D., FERTET A., LOTFI F. and GUALBERTO J.M.

Assessment of mitochondrial DNA copy number, stability and repair in Arabidopsis

In: Olivier Van Aken; Allan G. Rasmusson (ed) Plant Mitochondria - Methods and Protocols. Methods in Molecular Biology, vol 2363. Springer US., 2021. | DOI : 10.1007/978-1-0716-1653-6_20

FERTET A., GRAINDORGE S., KOECHLER S., DE BOER G.J., GUILLOTEAU-FONTENY E. and GUALBERTO J.M.

Sequence of the mitochondrial genome of Lactuca virosa suggests an unexpected role in Lactuca sativa’s evolution

Frontiers in Plant Science, 12:697136, 2021. | DOI : doi: 10.3389/fpls.2021.697136

PINEAU E., SAUVEPLANE V., GRIENENBERGER E., BASSARD J.E., BEISSON F. and PINOT F.

CYP77B1 a fatty acid epoxygenase specific to flowering plants

Plant Science, 307:110905, 2021. | DOI : https://doi.org/10.1016/j.plantsci.2021.110905

TARASENKO T.A., KLIMENKO E.S., TARASENKO V.I., KOULINTCHENKO M.V., DIETRICH A., LOTFI F. and KONSTANTINOV Y.M.

Plant mitochondria import DNA via alternative membrane complexes involving various VDAC isoforms

Mitochondrion, 60:43-58, 2021. | DOI : 10.1016/j.mito.2021.07.006

SCHNEIDER F., AGIN A., BALDACINI M., MAURER L., SCHENCK M., ALEMANN M., SOLIS M., HELMS J., VILLETTE C., ARTZNER T., KREMER S. and HEINTZ D.

Acute-onset delirium in intensive care COVID patients: association of imperfect brain repair with foodborne micro-pollutants

European journal of neurology, 3443-47, 2021. | DOI : https://doi.org/10.1111/ene.14776

MAURER L., ZUMSTEG J., LUTZ C., OTTERMATTE M.P., WANKO A., HEINTZ D. and VILLETTE C.

Towards a model for road runoff infiltration management

NPJ Clean Water, 5, 2021. | DOI : 10.1038/s41545-021-00136-z

HIRSCHLER A., CARAPITO C., MAURER L., ZUMSTEG J., VILLETTE C., HEINTZ D., DAHL C., AL-NAYAL A., SANGAL V., MAHMOUD H., VAN DORSSELAER A. and ISMAIL W.

Biodesulfurization induces reprogramming of sulfur metabolism in Rhodococcus qingshengii IGTS8: Proteomics and untargeted metabolomics

Microbiology spectrum, 9(2):692-21, 2021. | DOI : https://doi.org/10.1128/Spectrum.00692-21

KUBINA J., GELDREICH A., GALES J.P., BAUMBERGER N., BOUTON C., RYABOVA L., GRASSER K., KELLER M. and DIMITROVA M.

Nuclear export of plant pararetrovirus mRNAs involves the TREX complex, two viral proteins and the highly structured 5' leader region

Nucleic Acid Research, , 2021. | DOI : doi.org/10.1093/nar/gkab653

MUTSURO-AOKI H., TERAMURA H., TAMUKAI R., FUKUI M., KUSANO H., RYABOVA L. and SHIMADA H.

Dissection of a rice OsMac1 mRNA 5' UTR to uncover regulatory elements that are responsible for its efficient translation

PLoS ONE, e0253488, 2021. | DOI : 10.1371/journal.pone.0253488

WARREN J., SALINAS-GIEGÉ T., TRIANT D., TAYLOR D., MARÉCHAL-DROUARD L. and SLOAN D.

Rapid shifts in mitochondrial tRNA import in a plant lineage with extensive mitochondrial tRNA gene loss

Molecular Biology and Evolution, 18:64-78, 2021.

MANAVSKI N., MATHIEU S., ROJAS M., MÉTEIGNIER L.V., BRACHMANN A., BARKAN A. and HAMMANI K.

In vivo stabilization of endogenous chloroplast RNAs by customized artificial pentatricopeptide repeat proteins

Nucleic Acid Research, 49:5985–5997, 2021. | DOI : 10.1093/nar/gkab390

CHEVALIER Q., GALLÉ J.B., WASSER N., MAZAN V., VILLETTE C., MUTTERER J., ELUSTONDO M.M., GIRARD N., ELHABIRI M., SCHALLER H., HEMMERLIN A. and VONTHRON-SENECHEAU C.

Unravelling the Puzzle of Anthranoid Metabolism in Living Plant Cells Using Spectral Imaging Coupled to Mass Spectrometry

Metabolites, 11:571, 2021. | DOI : 10.3390/metabo11090571

CHERY I., ARRIVÉ M., PROST M., ZUMSTEG J., HEINTZ D., EVANS A.L., GAUQUELIN-KOCH G., ARNEMO J.M., SWENSON J.E., LEFAI E., BERTILE F., SIMON C., BLANC S. and GIROUD S.

HIBERNATING BROWN BEARS ARE PROTECTED AGAINST ATHEROGENIC DYSLIPIDEMIA

Scientific Reports, 5, 2021.

INCARBONE M., CLAVEL M., MONSION B., KUHN L., SCHEER H., VANTARD E., POIGNAVENT V., DUNOYER P., GENSCHIK P. and RITZENTHALER C.

Immunocapture of dsRNA-bound proteins provides insight into Tobacco rattle virus replication complexes and reveals Arabidopsis DRB2 to be a wide-spectrum antiviral effector

Plant Cell, 1, 2021.

GENTRIC N., GENSCHIK P. and NOIR S.

Connections between the Cell Cycle and the DNA Damage Response in Plants

International Journal of Molecular Sciences, 9558, 2021. | DOI : https://doi.org/10.3390/ijms22179558

MOGHADAM S., ALEBRAHIM M.T., TOBEH A., MOHEBODINI M., WERCK-REICHHART D., MACGREGOR D. and TSENG T.

Redroot pigweed (Amaranthus retroflexus L.) and lamb's quarters ‎‎(Chenopodium album L.) populations exhibit a high degree of ‎morphological and biochemical diversity.

Frontiers in Plant Science, 29, 2021. | DOI : 10.3389/fpls.2021.593037M

SINGH G., PEREIRA D., BAUDREY S., HOFFMANN E., RYCKELYNCK M., ASNACIOS A. and CHABOUTÉ M.E.

Real-time tracking of root hair nucleus morphodynamics using a microfluidic approach

Plant Journal, 108:303-313, 2021. | DOI : 10.1111/tpj.15511

BRADAI M., AMORIM-SILVA V., BELGAROUI N., ESTEBAN DEL VALLE A., CHABOUTÉ M.E., SCHMIT A.C., LOZANO-DURAN R., ANGEL BOTELLA M., MOEZ H. and EBEL C.

Wheat Type One Protein Phosphatase Participates in the Brassinosteroid Control of Root Growth via Activation of BES1

International Journal of Molecular Sciences, 22:10424, 2021. | DOI : 10.3390/ijms221910424

CAMUT L., GALLOVA B., JILLI L., SIRLIN-JOSSERAND M., CARRERA E., ACHARD L., RUFFEL S., KROUK G., THOMAS S.G., HEDDEN P., PHILLIPS A.L., DAVIÈRE J.M. and ACHARD P.

Nitrate signaling promotes growth by upregulating gibberellin biosynthesis and destabilization of DELLA proteins

Current Biology, 31:1-12, 2021. | DOI : 10.1016/j.cub.2021.09.024

CLAVEL M., LECHNER E., INCARBONE M., VINCENT T., COGNAT V., SMIRNOVA E., LECORBEILLER M., BRAULT V., ZIEGLER-GRAFF V. and GENSCHIK P.

Atypical molecular features of RNA silencing against the phloem-restricted polerovirus TuYV

Nucleic Acid Research, 11274–11293, 2021. | DOI : 10.1093/nar/gkab802

MOLINIER J.

Repair of UV-induced DNA damage and RNA : a helpful interplay for genome surveillance

In: Thierry Douki and Roberto Improta (ed) DNA photodamage: from light absorption to cellular responses and skin cancer, vol 21. Royal Society of Chemistry., 2021. | DOI : 10.1039/9781839165580

DARNET S.

Phytosterol Profiles, Genomes, ad Enzymes - an Overview

Frontiers in Plant Science, 12:665206, 2021. | DOI : 10.3389/fpls.2021.665206

HANSEN C.C., NELSON D.R. and WERCK-REICHHART D.

Plant cytochrome P450 plasticity and evolution

Molecular Plant, 14(1244-1265), 2021. | DOI : https://doi.org/10.1016/j.molp.2021.06.028

WALTZ F., GIEGÉ P. and HASHEM Y.

Purification and cryo-electron microscopy analysis of plant mitochondrial ribosomes

bio-protocol, 11, e4111, 2021.

WIERZBICKI A., BLEVINS T. and SWIEZEWSKI S.

Long Noncoding RNAs in Plants

Annual Review of Plant Biology, 72:245-271, 2021. | DOI : 10.1146/annurev-arplant-093020-035446

WALTZ F., SALINAS-GIEGÉ T., ENGLMEIER R., MEICHEL H., SOUFARI H., KUHN L., PFEFFER S., FÖRSTER F., ENGEL B., GIEGÉ P., MARÉCHAL-DROUARD L. and HASHEM Y.

How to build a ribosome from RNA fragments in Chlamydomonas mitochondria

Nature Communications, 12:7176, 2021. | DOI : https://doi.org/10.1038/s41467-021-27200-z

QUQUE M., VILLETTE C., CRISCUOLO F., SUEUR C., BERTILE F. and HEINTZ D.

Eusociality is linked to caste-specific differences in metabolism, immune system, and somatic maintenance-related processes in an ant species

Cellular and Molecular Life Sciences, 1-5, 2021. | DOI : https://doi.org/10.1007/s00018-021-04024-0

KUBINA J., GELDREICH A., BAUMBERGER N., BOUTON C., GRASSER K.D., KELLER M. and DIMITROVA M.

Nuclear export of plant pararetrovirus mRNAs involves the TREX complex, two viral proteins and the highly structured 5’ leader region

Nucleic Acid Research, , 2021. | DOI : 10.1093/nar/gkab653

KUBINA J., GELDREICH A., BAUMBERGER N., BOUTON C., GRASSER K.D., KELLER M. and DIMITROVA M.

Nuclear export of plant pararetrovirus mRNAs involves the TREX complex, two viral proteins and the highly structured 5’ leader region

Nucleic Acid Research, 49, 2021. | DOI : 10.1093/nar/gkab653

HEITZ T.

Jasmonate Metabolism : Shaping Signals for Plant Stress Adaptation and Development.

In: Joseph Jez (ed) Encyclopedia of Biological Chemistry, vol 2. Elsevier Major Reference Work., 2021. | DOI : 10.1016/B978-0-12-819460-7.00019-0

MARQUIS V., SMIRNOVA E., GRAINDORGE S., DELCROS P., VILLETTE C., ZUMSTEG J., HEINTZ D. and HEITZ T.

Broad-spectrum stress tolerance conferred by suppressing jasmonate signaling attenuation in Arabidopsis JASMONIC ACID OXIDASE (JAO) mutants

Plant Journal, in press, 2021. | DOI : 10.1111/TPJ.15598

WOLF E., GAQUEREL E., SCHARMANN M., YANT L. and KOCH M.

Evolutionary footprints of a cold relic in a rapidly warming world

eLife, 10(e71572), 2021. | DOI : 10.7554/eLife.71572

DONG L., ALMEIDA A., POLLIER J., KHAKIMOV B., BASSARD J.E., MIETTINEN K., STAERK D., MEHRAN R., OLSEN C.E., MOTAWIA M.S., GOOSSENS A. and BAK S.

An independent evolutionary origin for insect deterrent cucurbitacins in Iberis amara

Molecular Biology and Evolution, 38(11):4659–4673, 2021. | DOI : https://doi.org/10.1093/molbev/msab213

HANSEN C.C., NELSON D.R., MOLLER B.L. and WERCK D.

Plant cytochrome P450 plasticity and evolution

Molecular Plant, 14:1244-1265, 2021. | DOI : https://doi.org/10.1016/j.molp.2021.06.028

HUANG C., SEDE A.R., MUTTERER J., BOUTANT E. and HEINLEIN M.

Suppression of a dsRNA-induced plant immunity pathway by viral movement protein

BioRxiv, 10.1101/2021.10.30.466425, 2021. | DOI : 10.1101/2021.10.30.466425

FLOOD P., THEEUWEN T., SCHNEEBERGER K., KEIZER P., KRUIJER W., SEVERING E., KOUKLAS E., HAGEMAN J., WIJFJES R., CALVO-BALTANAS V., BECKER F., SCHNABEL S., WILLEMS L., LIGTERINK W., VAN ARKEL J., MUMM R., GUALBERTO J.M., SAVAGE L., KRAMER D., KEURENTJES J., VAN EEUWIJK F., KOORNNEEF M., HARBINSON J., AARTS M. and WIJNKER E.

Reciprocal cybrids reveal how organellar genomes affect plant phenotypes

Nature Plants, 6:13-21, 2020. | DOI : 10.1038/s41477-019-0575-9

BÖHRER M., RYMEN B., HIMBER C., GERBAUD A., PFLIEGER D., LAUDENCIA-CHINGCUANCO D., CARTWRIGHT A., VOGEL J., SIBOUT R. and BLEVINS T.

Integrated genome-scale analysis and northern blot detection of retrotransposon siRNAs across plant species

In: Heinlein M. (ed) RNA tagging. Methods in Molecular Biology, vol 2166. Humana New York, NY., 2020. | DOI : 10.1007/978-1-0716-0712-1_23

MOLINIER J.

The multilayers control of ARGONAUTE 1 contents

Molecular Plant, 13(1), 2020. | DOI : 10.1016/j.molp.2019.11.012

CHEVIGNY N., SCHATZ-DAAS D., LOTFI F. and GUALBERTO J.M.

DNA Repair and the Stability of the Plant Mitochondrial Genome

International Journal of Molecular Sciences, 21:328, 2020. | DOI : 10.3390/ijms21010328

NAAKE T., GAQUEREL E. and FERNIE A.

Annotation of Specialized Metabolites from High-Throughput and High-Resolution Mass Spectrometry Metabolomics

In: Methods in Molecular Biology book series (ed) Computational Methods and Data Analysis for Metabolomics., Humana., 2020. | DOI : 10.1007/978-1-0716-0239-3_12

ZIEGLER-GRAFF V.

Molecular Insights into Host and Vector Manipulation by Plant Viruses

Viruses, 12:263, 2020. | DOI : doi:10.3390/v12030263

BOGAERT F., MARMONNIER A., BOISSINOT S., ZIEGLER-GRAFF V., CHESNAIS Q., VILLEROY C., DRUCKER M. and BRAULT V.

Impact of Mutations in Arabidopsis thaliana Metabolic Pathways on Polerovirus Accumulation, Aphid Performance, and Feeding Behavior

Viruses, 12:146, 2020. | DOI : DOI: 10.3390/v12020146

WALTZ F., SOUFARI H., BOCHLER A., GIEGÉ P. and HASHEM Y.

Cryo-EM structure of the RNA-rich plant mitochondrial ribosome.

Nature Plants, 6, 377-383, 2020. | DOI : https://doi.org/10.1038/s41477-020-0631-5

WALTZ F. and GIEGÉ P.

Striking diversity of mitochondrial specific translation processes across eukaryotes.

Trends in Biochemical Sciences, 45, 149-162, 2020. | DOI : https://doi.org/10.1016/j.tibs.2019.10.004

GOSWAMI R., ASNACIOS A., MILANI P., GRAINDORGE S., HOULNÉ G., MUTTERER J., HAMANT O. and CHABOUTÉ M.E.

Mechanical shielding in plant nuclei.

Current Biology, 2013-2025, 2020. | DOI : 10.1016/j.cub.2020.03.059

GUO Z., LI Z., LIU Y., AN Z., PENG M., SHEN W.H., DONG A. and YU Y.

MRG1/2 histone methylation readers and HD2C histone deacetylase associate in repression of the florigen gene FT to set a proper flowering time in response to day-length changes

New Phytologist, 227:1453-1466, 2020. | DOI : 10.1111/nph.16616

AN Z., YIN L., LIU Y., PENG M., SHEN W.H. and DONG A.

The histone methylation readers MRG1/MRG2 and the histone chaperones NRP1/NRP2 associate in fine-tuning Arabidopsis flowering time

Plant Journal, 103:1010-1024, 2020. | DOI : 10.1111/tpj.14780

ZHANG X., MENARD R., LI Y., CORUZZI G., HEITZ T., SHEN W.H. and BERR A.

Arabidopsis SDG8 Potentiates the Sustainable Transcriptional Induction of the Pathogenesis-Related Genes PR1 and PR2 During Plant Defense Response

Frontiers in Plant Science, 11:277, 2020. | DOI : 10.3389/fpls.2020.00277

MARQUIS V., SMIRNOVA E., POIRIER L., ZUMSTEG J., SCHWEIZER F., REYMOND P. and HEITZ T.

Stress- and pathway-specific impacts of impaired jasmonoyl- isoleucine (JA-Ile) catabolism on defense signalling and biotic stress resistance

Plant Cell and Environment, 43:1558-1570, 2020. | DOI : 10.1111/pce.13753

MÉTEIGNIER L.V., GHANDOUR R., MEIERHOFF K., ZIMMERMANN A., CHICHER J., BAUMBERGER N., ALIOUA A., MEURER J., ZOSCHKE R. and HAMMANI K.

The Arabidopsis mTERF-repeat MDA1 protein plays a dual function in transcription and stabilization of specific chloroplast transcripts within the psbE and ndhH operons

New Phytologist, 227(5):1376–1391, 2020. | DOI : 10.1111/nph.16625

MOLINIER J.

To be, or not to be, remethylated

Nature Plants, 6:606-607, 2020. | DOI : 10.1038/s41477-020-0696-1

BAJCZYK M., LANGE H., BIELEWICZ D., SZEWC L., BHAT S.S., DOLATA J., KUHN L., SZWEYKOWSKA-KULINSKA Z., GAGLIARDI D. and JARMOLOWSKI A.

SERRATE Interacts With the Nuclear Exosome Targeting (NEXT) Complex to Degrade Primary miRNA Precursors in Arabidopsis

Nucleic Acids Research, 6839–6854, 2020. | DOI : 10.1093/nar/gkaa373

SCHEER H., DE ALMEIDA C., SIKORSKA N., KOECHLER S., GAGLIARDI D. and ZUBER H.

High-Resolution Mapping of 3’ Extremities of RNA Exosome Substrates by 3’ RACE-Seq

In: LaCava J, Vaňáčová Š (eds) The Eukaryotic RNA Exosome. Methods in Molecular Biology, vol 2062. Humana New York, NY., 2020. | DOI : 10.1007/978-1-4939-9822-7_8

GENTRIC N., MASOUD K., JOURNOT R.P., COGNAT V., CHABOUTÉ M.E., NOIR S. and GENSCHIK P.

The F-box-like protein FBL17 is a regulator of DNA-damage response and co-localizes with RETINOBLASTOMA RELATED 1 at DNA lesion sites

Plant Physiology, 20.00188, 2020. | DOI : https://doi.org/10.1104/pp.20.00188

HARDION L., PERRIER A., MARTINEZ M., NAVROT N., GAQUEREL E., TOURNAY F., NGUEFACK J. and COMBROUX I.

Integrative revision of Dianthus superbus subspecies reveals different degrees of differentiation, from plasticity to species distinction

Systematics and Biodiversity, 18(3), 2020. | DOI : 10.1080/14772000.2020.1737979

LI D., HALITSCHKE R., BALDWIN I.T. and GAQUEREL E.

Information theory tests critical predictions of plant defense theory for specialized metabolism

Science Advances, 6(24):eaaz0381, 2020. | DOI : 10.1126/sciadv.aaz0381

DAHLET T., ARGÜESO LLEIDA A., AL ADHAMI H., DUMAS M., BENDER A., NGONDO P., TANGUY M., VALLET J., AUCLAIR G., BARDET A.F. and WEBER M.

Genome-wide analysis in the mouse embryo reveals the importance of DNA methylation for transcription integrity

Nature Communications, 11(3153), 2020. | DOI : 10.1038/s41467-020-16919-w

WALTZ F., CORRE N., HASHEM Y. and GIEGÉ P.

Specificities of the plant mitochondria translation apparatus.

Mitochondrion, 53:30-37, 2020. | DOI : 32334144

ORLOV I., HEMMER C., ACKERER L., LORBER B., GHANNAM A., POIGNAVENT V., HLEIBIEH K., SAUTER C., SCHMITT-KEICHINGER C., BELVAL L., HILY J.M., MARMONIER A., KOMAR V., GERSCH S., SCHELLENBERGER P., BRON P., VIGNE E., MUYLDERMANS S., LEMAIRE O., DEMANGEAT G., RITZENTHALER C. and KLAHOLZ B.P.

Structural basis of nanobody recognition of grapevine fanleaf virus and of virus resistance loss

Proceedings of the National Academy of Sciences of the United States of America, 10848-10855, 2020. | DOI : doi.org/10.1073/pnas.1913681117

KUMAR S.R., RAI A., BOMZAN D.P., KUMAR K., HEMMERLIN A., DWIVEDI V., GODBOLE R.C., BARVKAR V., SHANKER K., SHILPASHREE H.B., BHATTACHARYA A., SMITHA A.R., HEGDE N. and NAGEGOWDA D.A.

A plastid localized bona fide geranylgeranyl diphosphate synthase plays a necessary role in monoterpene indole alkaloid biosynthesis in Catharanthus roseus

Plant Journal, 103(1):248-265, 2020. | DOI : 10.1111/TPJ.14725

VALIM H., DALTON H., JOO Y., MCGALE E., HALITSCHKE R., GAQUEREL E., BALDWIN I.T. and SCHUMAN M.C.

TOC1 in Nicotiana Attenuata Regulates Efficient Allocation of Nitrogen to Defense Metabolites Under Herbivory Stress

New Phytologist, 228(4):1227-1242, 2020. | DOI : 10.1111/nph.16784

ROUJOL D., HOFFMANN L., CLEMENTE H.S., SCHMITT-KEICHINGER C., RITZENTHALER C., BURLAT V. and JAMET E.

Plant Cell Wall Proteomes: Bioinformatics and Cell Biology Tools to Assess the Bona Fide Cell Wall Localization of Proteins

In: Jamet, E. (eds) The plant cell wall: Methods and protocols, chapter 25. Popper, Zoe A.., 2020. | DOI : 10.1007/978-1-0716-0621-6_25

CASATI P., ROLDAN-ARJONA T. and MOLINIER J.

Plant Genome-Epigenome Integrity under Environmental Stress

Frontiers in Plant Science, 1, 2020. | DOI : 10.3389/fpls.2020.584126

LAZAREVA E., LEZZHOV A.A., CHERGINTSEV D.A., GOLYSHEV S.A., DOLJA V.V., MOROZOV S.Y., HEINLEIN M. and SOLOVYEV A.G.

Reticulon-like properties of a plant virus-encoded movement protein

New Phytologist, 229(2):1036-1066, 2020. | DOI : 10.1111/nph.16905

PEÑA E.J. and HEINLEIN M.

Visualization of transiently expressed mRNA in plants using MS2

In: Heinlein M. (ed) RNA tagging. Methods in Molecular Biology, vol 2166. Humana New York, NY., 2020. | DOI : 10.1007/978-1-0716-0712-1_6

HEINLEIN M.

RNA tagging

Methods in Molecular Biology, Humana, 486, 2020. | DOI : 10.1007/978-1-0716-0712-1

HEMONO M., UBRIG E., AZEREDO K., SALINAS-GIEGÉ T., MARÉCHAL-DROUARD L. and DUCHÊNE A.M.

Arabidopis Voltage-Dependent Anion Channels (AtVDACs): overlapping and specific functions in mitochondria

Cells, 9:1023, 2020. | DOI : 10.3390/cells9041023

LALANDE S., CHERY M., UBRIG E., HUMMEL G., KUBINA J., GELDREICH A. and MARÉCHAL-DROUARD L.

Transfection of small non-coding RNAs into Arabidopsis thaliana protoplasts

Methods in Molecular Biology, 413-429, 2020. | DOI : 10.1093/nar/16.22.10425

GILMER D.

Eat me !

Virologie, 24(1):5-7, 2020. | DOI : 10.1684/vir.2020.0806.

CAIGNARD G., DECROLY E., DIMITROVA M., GILMER D., GOSSELIN-GRENET A.S., GRUFAT H., MARTIN-LATIL S., MASSIN P., MUNIER S., OGLIASTRO M., SAULNIER A. and TORDO N.

À quelque chose, Covid est bon : SFV 2.0

Virologie, 24(3):133-134, 2020. | DOI : 10.1684/vir.2020.0846

MAURER L., VILLETTE C., ZUMSTEG J., WANKO A. and HEINTZ D.

Large scale micropollutants and lipids screening in the sludge layers and the ecosystem of a vertical flow constructed wetland

Science of the Total Environment, 1, 2020. | DOI : https://doi.org/10.1016/j.scitotenv.2020.141196

GALES J.P., KUBINA J., GELDREICH A. and DIMITROVA M.

Strength in Diversity: Nuclear Export of Viral RNAs

Viruses, 12:1014-1050, 2020. | DOI : doi:10.3390/v12091014

KUBINA J., GALES J.P., GELDREICH A., BOUTON C., KELLER M. and DIMITROVA M.

Export nucléaire des ARN viraux chez les métazoaires

Virologie, 24(4):246-73, 2020. | DOI : doi:10.1684/vir.2020.0857

JOHANN TO BERENS P. and MOLINIER J.

Formation and recognition of UV-induced DNA damage within genome complexity

International Journal of Molecular Sciences, 18:6689, 2020. | DOI : 10.3390/ijms21186689

AGIN A., BLANC F., BOUSIGES O., VILLETTE C., PHILIPPI N., DEMYUNCK C., MARTIN-HUNYADI C., CRETIN B., LANG S., ZUMSTEG J., NAMER I.J. and HEINTZ D.

Environmental exposure to phthalates and dementia with Lewy bodies: contribution of metabolomics

Journal of Neurology, Neurosurgery & Psychiatry, 1, 2020. | DOI : http://dx.doi.org/10.1136/jnnp-2020-322815

VILLETTE C., MAURER L. and HEINTZ D.

Investigation of Xenobiotics Metabolism In Salix alba Leaves via Mass Spectrometry Imaging

Journal of Visualized Experiments, 1, 2020. | DOI : 10.3791/61011

INCARBONE M. and RITZENTHALER C.

Double-stranded RNA pull-down to characterize viral replication complexes in plants

In: Ritzenthaler Christophe (ed) Methods in molecular biology: RNA tagging. Methods in Molecular Biology, chapter 18. Manfred HEINLEIN Humana Press (Springer New York)., 2020. | DOI : doi.org/10.1007/978-1-0716-0712-1

PEÑA E.J., ROBLES LUNA G. and HEINLEIN M.

In vivo imaging of tagged mRNA in plant tissues using the bacterial transcriptional antiterminator BglG

Plant Journal, 105(1):271-281, 2020. | DOI : 10.1111/tpj.15035

INCARBONE M., SCHEER H., HILY J.M., KUHN L., ERHARDT M., DUNOYER P., ALTENBACH D. and RITZENTHALER C.

Characterization of a DCL2-insensitive Tomato bushy stunt virus isolate infecting Arabidopsis thaliana

Viruses, 1121, 2020. | DOI : doi.org/10.3390/v12101121

DU K., LUO Q., YIN L., WU J., LIU Y., GAN J., DONG A. and SHEN W.H.

OsChz1 acts as a histone chaperone in modulating chromatin organization and genome function in rice

Nature Communications, 11(1):5717, 2020. | DOI : 10.1038/s41467-020-19586-z

LUO Q., WANG B., WU Z., JIANG W., WANG Y., DU K., ZHOU N., ZHENG L., GAN J., SHEN W.H., MA J. and DONG A.

NAP1-RELATED PROTEIN1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B

Proceedings of the National Academy of Sciences of the United States of America, 117:30391-30399, 2020. | DOI : 10.1073/pnas.2011089117

FREEL K.C., FOUTEAU S., ROCHE D., FARASIN J., HUBER A., KOECHLER S., PERES M., CHIBOUB O., VARET H., PROUX C., DESCHAMPS J., BRIANDET R., CRUVEILLER S., LIÈVREMONT D., COPPÉE J.Y., BARBE V. and ARSÈNE-PLOETZE F.

Effect of arsenite and growth in biofilm conditions on the evolution of Thiomonas sp. CB2

Microbial Genomics, 6(10):mgen00044, 2020. | DOI : 10.1099/mgen.0.000447

PITZALIS N., AMARI K., GRAINDORGE S., PFLIEGER D., DONAIRE L., WASSENEGGER M., LLAVE C. and HEINLEIN M.

Turnip mosaic virus in oilseed rape activates networks of sRNA-mediated interactions between viral and host genomes

Communications Biology, 3:702, 2020. | DOI : 10.1038/s42003-020-01425-y

SOUFARI H., PARROT C., KUHN L., HASHEM Y. and WALTZ F.

Specific features and assembly of the plant mitochondrial complex I revealed by cryo-EM

Nature Communications, 11, 5195, 2020. | DOI : https://doi.org/10.1038/s41467-020-18814-w

GOSWAMI R., ASNACIOS A., HAMANT O. and CHABOUTÉ M.E.

Is the plant nucleus a mechanical rheostat?

Current Opinion in Plant Biology, 57:155-163, 2020. | DOI : 10.1016/j.pbi.2020.09.001.

LALANDE S., MERRET R., SALINAS-GIEGÉ T. and MARÉCHAL-DROUARD L.

Arabidopsis tRNA-derived fragments as potential modulators of translation

RNA Biology, 17(8):1137-1148, 2020. | DOI : 10.1080/15476286.2020.1722514

HUMMEL G., BERR A., GRAINDORGE S., COGNAT V., UBRIG E., PFLIEGER D., MOLINIER J. and MARÉCHAL-DROUARD L.

Epigenetic silencing of clustered tDNAs in Arabidopsis

Nucleic Acids Research, 48:10297-10312, 2020. | DOI : 10.1093/nar/gkaa766

MONTGOMERY S., TANIZAWA Y., GALIK B., WANG N., ITO T., MOCHIZUKI T., AKIMCHEVA S., BOWMAN J., COGNAT V., MARÉCHAL-DROUARD L., EKKER H., HOUNG S., KOHCHI T., LIN S., LIU L., NAKAMURA Y., VALEEVA L., SHAKIROV E., SHIPPEN D., WEI W., YAGURA M., YAMAOKA S., YAMATO K., LIU C. and BERGER F.

Chromatin organization in early land plants reveals an ancestral association between H3K27me3, transposons, and constitutive heterochroatin

Current Biology, 30:573-588 e7, 2020. | DOI : 10.1016/j.cub.2019.12.015

FERNANDES DE ABREU D., SALINAS-GIEGÉ T., MARÉCHAL-DROUARD L. and REMY J.J.

Alanine tRNA translate environment into behavior in Caenorabditis elegans

Frontiers in Cellular and Developmental Biology, 8:1-26, 2020. | DOI : 10.3389/fcell.2020.571359

GOSWAMI R., ASNACIOS A., MILANI P., GRAINDORGE S., HOULNÉ G., MUTTERER J. and HAMANT O.

Mechanical Shielding in Plant Nuclei.

Current Biology, 8(30):2013-2025, 2020. | DOI : doi: 10.1016/j.cub.2020.03.059

PETITJEAN O., GIRARDI E., NGONDO P., LUPASHIN V. and PFEFFER S.

Genome-Wide CRISPR-Cas9 Screen Reveals the Importance of the Heparan Sulfate Pathway and the Conserved Oligomeric Golgi Complex for Synthetic Double-Stranded RNA Uptake and Sindbis Virus Infection

mSphere, 5(e00914-20):6, 2020. | DOI : 10.1128/mSphere.00914-20

LECHNER E.

CUL3BPM E3 ubiquitin ligases regulate MYC2, MYC3, and MYC4 stability and JA responses.

Proceedings of the National Academy of Sciences of the United States of America, 6205-6215, 2020. | DOI : 10.1073/pnas.1912199117

YANG C., YIN L., XIE F., MA M., HUANG S., ZENG Y., SHEN W.H., DONG A. and LI L.

AtINO80 represses photomorphogenesis by modulating nucleosome density and H2A.Z incorporation in light-related genes

Proceedings of the National Academy of Sciences of the United States of America, 117(52):33679-33688, 2020. | DOI : 10.1073/pnas.2001976117

SOUFARI H., WALTZ F., PARROT C., DURRIEU-GAILLARD S., BOCHLER A., KUHN L., SISSLER M. and HASHEM Y.

Structure of the mature kinetoplastids mitoribosome and insights into its large subunit biogenesis

Proceedings of the National Academy of Sciences of the United States of America, 1, 2020. | DOI : https://doi.org/10.1073/pnas.2011301117

LAZAREVA E., LEZZHOV A.A., DOLJA V.V., MOROZOV S.Y., HEINLEIN M. and SOLOVYEV A.G.

Constriction of endoplasmic reticulum tubules by the viral movement protein BMB2 is associated with local BMB2 anchorage at constriction sites

Plant Signaling and Behavior, 16(3):e1856547, 2020. | DOI : 10.1080/15592324.2020.1856547

WANG D., TABTI R., ELDERWISH S., DJEHAL A., CHOUHA N., PINOT F., YU P., NEBIGIL C.G. and DÉSAUBRY L.

Evolutionarily conserved SFPH proteins as therapeutic targets for a myriad of diseases

Bioorganic & Medicinal Chemistry, 127600, 2020.

SINGH A.P., PANDEY B., MEHRA P., HEITZ T. and GIRI J.

OsJAZ9 overexpression modulates jasmonic acid biosynthesis and potassium deficiency responses in rice

Plant Molecular Biology, 104:397-410, 2020. | DOI : 10.1007/s11103-020-01047-2

RYMEN B., FERRAFIAT L. and BLEVINS T.

Non-coding RNA polymerases that silence transposable elements and reprogram gene expression in plants

Transcription, 11(3-4):172–191, 2020. | DOI : https://doi.org/10.1080/21541264.2020.1825906

MAURER L., VILLETTE C., REIMINGER N., JURADO X., LAURENT J., NUEL M., MOSÉ R., WANKO A. and HEINTZ D.

Distribution and degradation trend of micropollutants in a surface flow treatment wetland revealed by 3D numerical modelling combined with LC-MS/MS

Water Research, 190:11, 2020. | DOI : https://doi.org/10.1016/j.watres.2020.116672

GILMER D.

Portraits de virus. Voyage au coeur des cellules, de Philippe Roingeard

Virologie, 24(5):343, 2020. | DOI : 10.1684/vir.2020.0858

ABDOLLAHI F., ALEBRAHIM M.T., NGOV C., LALLEMAND E., ZHENG Y., VILLETTE C., ZUMSTEG J., ANDRE F., NAVROT N., WERCK D. and MIESCH L.

Innate promiscuity of the CYP706 family of P450 enzymes provides a suitable context for the evolution of dinitroaniline resistance in weed

New Phytologist, , 2020. | DOI : 10.1111/nph.17126

THOMPSON D., COGNAT V., GOODFELLOW M., KOECHLER S., HEINTZ D., CARAPITO C., VAN DORSSELAER A., MAHMOUD H., SANGAL V. and ISMAIL W.

Phylogenomic Classification and Biosynthetic Potential of the Fossil Fuel-Biodesulfurizing Rhodococcus Strain IGTS8.

Frontiers in Microbiology, 968-974, 2020.

WOLFF P., VILLETTE C., ZUMSTEG J., HEINTZ D., ANTOINE L., CHANE-WOON-MING B., DROOGMANS L., GROSJEAN H. and WESTHOF E.

Comparative patterns of modified nucleotides in individual tRNA species from a mesophilic and two thermophilic archaea.

RNA, 26:1957-1975, 2020.

DARNET S.

Inhibition of Phytosterol Biosynthesis by Azasterols

Molecules, 1111, 2020.

POTUSCHAK T., PALATNIK J., SCHOMMER C., SIERRO N., IVANO N., KWON Y., GENSCHIK P., DAVIÈRE J.M. and OTTEN L.

Inhibition of Arabidopsis thaliana CIN-like TCP transcription factors by Agrobacterium T-DNA-encoded 6B proteins.

Plant Journal, 1303-1317, 2020. | DOI : doi: 10.1111/tpj.14591

CHICO J.M., LECHNER E., FERNANDEZ-BARBERO G., CANIBANO E., GARCÍA-CASADO G., FRANCO-ZORRILLA J.M., HAMMANN P., ZAMARREÑO A.M., GARCÍA-MINA J.M., RUBIO V., GENSCHIK P. and SOLANO R.

CUL3 BPM E3 ubiquitin ligases regulate MYC2, MYC3, and MYC4 stability and JA responses

Proceedings of the National Academy of Sciences of the United States of America, 6205-6215, 2020. | DOI : 10.1073/pnas.1912199117

OROSA B., ÜSTÜN S., CALDERÓN VILLALOBOS L.I.A., GENSCHIK P., GIBBS D., HOLDSWORTH M.J., ISONO E., LOIS M., TRUJILLO M. and SADANANDOM A.

Plant proteostasis - shaping the proteome: a research community aiming to understand molecular mechanisms that control protein abundance

New Phytologist, , 2020.

SCHALLER H.

Cholesterol asymmetry at the tip of filipodia during cell adhesion

The FASEB Journal, 34:6185-6197, 2020. | DOI : 10.1096/fj.201900065RR.

SCHALLER H.

Aphid growth and reproduction on plants with altered profiles: novel insights using Arabidopsis mutant and overexpression lines.

Journal of Insect Physiology, 123:104054, 2020. | DOI : doi: 10.1016/j.jinsphys.2020.104054

MANAVSKI N., MÉTEIGNIER L.V., ROJAS M., BRACHMANN A., BARKAN A. and HAMMANI K.

In vivo stabilization of endogenous chloroplast RNAs by customized artificial pentatricopeptide repeat proteins

BioRxiv, 10.1101/2020.11.21.392746, 2020. | DOI : 10.1101/2020.11.21.392746

MÉTEIGNIER L.V., GHANDOUR R., ZIMMERMANN A., KUHN L., MEURER J., ZOSCHKE R. and HAMMANI K.

Arabidopsis mTERF9 protein promotes chloroplast ribosomal assembly and translation by establishing ribonucleoprotein interactions in vivo.

BioRxiv, 10.1101/2020.06.16.153288, 2020. | DOI : 10.1101/2020.06.16.153288

ZHAO W., NEYT P., VAN LIJSEBETTENS M., SHEN W.H. and BERR A.

Interactive and non-interactive roles of histone H2B monoubiquitination and H3K36 methylation in the regulation of active gene transcription and control of plant growth and development

New Phytologist, 221:1101-1116, 2019. | DOI : 10.1111/nph.15418

JIANG W., LI Z., YAO X., ZHENG B., SHEN W.H. and DONG A.

jaw-1D: a gain-of-function mutation responsive to paramutation-like induction of epigenetic silencing

Journal of Experimental Botany, 70(2):459-468, 2019. | DOI : 10.1093/jxb/ery365

PEDROZA-GARCÍA J.A., NÁJERA-MARTÍNEZ M., MAZUBERT C., AGUILERA-ALVARADO P., DROUIN-WAHBIE J., SÁNCHEZ-NIETO S., GUALBERTO J.M., RAYNAUD C. and PLASENCIA J.

Role of pyrimidine salvage pathway in the maintenance of the organellar and nuclear genome integrity

Plant Journal, 97(3):430-446, 2019. | DOI : 10.1111/tpj.14128

TENG L., FAN X., NELSON D., HAN W., ZHANG X., XU D., RENAULT H., MARKOV G. and YE N.

Diversity and evolution of cytochromes P450 in stramenopiles

Planta, 249(3):647–661, 2019. | DOI : 10.1007/s00425-018-3028-1

RENAULT H., WERCK-REICHHART D. and WENG J.K.

Harnessing lignin evolution for biotechnological applications

Current Opinion in Biotechnology, 56:105-111, 2019. | DOI : 10.1016/j.copbio.2018.10.011

WANG S., WANG R., LIU T., LV C., LIANG J., KANG C., ZHOU L., GUO J., CUI G., ZHANG Y., WERCK-REICHHART D., GUO L. and HUANG L.

CYP76B74 catalyzes the 3''-hydroxylation of geranylhydroquinone in shikonin biosynthesis.

Plant Physiology, 179:402-414, 2019. | DOI : doi: 10.1104/pp.18.01056.

MEGEL C., HUMMEL G., LALANDE S., UBRIG E., COGNAT V., MORELLE G., SALINAS-GIEGÉ T., DUCHÊNE A.M. and MARÉCHAL-DROUARD L.

Plant RNases T2, but not Dicer-like proteins, are major players of tRNA-derived fragments biogenesis

Nucleic Acids Research, 47(2):941-952, 2019. | DOI : 10.1093/nar/gky1156

WALTZ F., NGUYEN T.T., ARRIVÉ M., BOCHLER A., CHICHER J., HAMMANN P., KUHN L., QUADRADO M., MIREAU H., HASHEM Y. and GIEGÉ P.

Small is big in Arabidopsis mitochondrial ribosome

Nature Plants, 5:106-117, 2019. | DOI : 10.1038/s41477-018-0339-y

VOLZ R., KIM S.K., MI J., RAWAT A.A., VELUCHAMY A., MARIAPPAN K.G., DAVIÈRE J.M., ACHARD P., BLILOU I., AL-BABILI S., BENHAMED M. and HIRT H.

INDETERMINATE-DOMAIN 4 (IDD4) coordinates immune responses with plant-growth in Arabidopsis thaliana

PLoS pathogens, 1-33, 2019. | DOI : 10.1371/journal.ppat.1007499

KANG H., MA J., WU D., SHEN W.H. and ZHU Y.

Functional coordination of the chromatin-remodeling factor AtINO80 and the histone chaperones NRP1/2 in inflorescence meristem and root apical meristem

Frontiers in Plant Science, 10:115, 2019. | DOI : 10.3389/fpls.2019.00115

KANG H., ZHANG C., AN Z., SHEN W.H. and ZHU Y.

AtINO80 and AtARP5 physically interact and play common as well as distinct roles in regulating plant growth and development

New Phytologist, 223:336-353, 2019. | DOI : 10.1111/nph.15780

SCHWARZEROVA K., BELLINVIA E., MARTINEK J., SIKOROVA L., DOSTAL V., LIBUSOVA L., BOKVAJ P., FISCHER L., SCHMIT A.C. and NICK P.

Tubulin is actively exported from the nucleus through the Exportin1/CRM1 pathway

Scientific Reports, 9:5725-5738, 2019. | DOI : 10.1038/s41598-019-42056-6

ALBER A., RENAULT H., BASILIO LOPES A., BASSARD J.E., LIU Z., ULLMANN P., LESOT A., BIHEL F., SCHMITT M., WERCK-REICHHART D. and EHLTING J.

Evolution of coumaroyl conjugate 3‐hydroxylases in land plants: Lignin biosynthesis and defense

Plant Journal, 99:924-936, 2019. | DOI : 10.1111/tpj.14373

NIEHL A. and HEINLEIN M.

Perception of double-stranded RNA in plant antiviral immunity

Molecular Plant Pathology, 20(9):1203-1210, 2019. | DOI : doi: 10.1111/mpp.12798

LIU B., LIU Y., WANG B., LUO Q., SHI J., GAN J., SHEN W.H., YU Y. and DONG A.

The transcription factor OsSUF4 interacts with SDG725 in promoting H3K36me3 establishment

Nature Communications, 10:2999, 2019. | DOI : 10.1038/s41467-019-10850-5

POLLIER J., DE GEYTER N., MOSES T., BOACHON B., FRANCO-ZORRILLA J., BAI Y., LACCHINI E., GHOLAMI A., VANDEN BOSSCHE R., WERCK-REICHHART D., GOORMACHTIG S. and GOOSSENS A.

The MYB transcription factor emission of methyl anthranilate 1 stimulates emission of methyl anthranilate from Medicago truncatula hairy roots.

Plant Journal, , 2019. | DOI : doi: 10.1111/tpj.14347.

LUKHOVITSKAYA N. and RYABOVA L.

Cauliflower mosaic virus transactivator protein (TAV) can suppress nonsense-mediated decay by targeting VARICOSE, a scaffold protein of the decapping complex.

Scientific Reports, 7042, 2019. | DOI : 10.1038/s41598-019-43414-0

NIAZI A.K., DELANNOY E., IQBAL R.K., MILESHINA D., VAL R., GABRYELSKA M., WYSZKO E., SOUBIGOU-TACONNAT L., SZYMANSKI M., BARCISZEWSKI J., LOTFI F., GUALBERTO J.M. and DIETRICH A.

Mitochondrial Transcriptome Control and Intercompartment Cross-Talk During Plant Development

Cells, 8:26, 2019. | DOI : 10.3390/cells8060583

YANG L., PERRERA V., SAPLAOURA E., APELT F., BAHIN M., KRAMDI A., OLAS J., MÜLLER-RÖBER B., SOKOLOWSKA E., ZHANG W., LI R., PITZALIS N., HEINLEIN M., ZHANG S., GENOVESIO A., COLOT V. and KRAGLER F.

m5C methylation guides systemic transport of messenger RNA over graft junctions in plants

Current Biology, 29(15):2465-2476, 2019. | DOI : 10.1016/j.cub.2019.06.042

LIU Y., LIU K., YIN L., YU Y., QI J., SHEN W.H., ZHU J., ZHANG Y. and DONG A.

H4K4me2 functions as a repressive epigenetic mark in plants

Epigenetics & Chromatin, 12:40, 2019. | DOI : 10.1186/s13072-019-0285-6

FERRAFIAT L., PFLIEGER D., SINGH J., THIEME M., BÖHRER M., HIMBER C., GERBAUD A., BUCHER E., PIKAARD C.S. and BLEVINS T.

The NRPD1 N-terminus contains a Pol IV-specific motif that is critical for genome surveillance in Arabidopsis

Nucleic Acids Research, 47(17):9037-9052, 2019. | DOI : 10.1093/nar/gkz618

HUMMEL G., WARREN J. and MARÉCHAL-DROUARD L.

The multi-faceted regulation of nuclear tRNA gene transcription

IUBMB Life, 0, 2019. | DOI : 10.1002/iub.2097

AGROFOGLIO Y.C., DELFOSSE V.C., CASSE M.F., HOPP H.E., BONACIC KRESIC I., ZIEGLER-GRAFF V. and DISTÉFANO A.J.

P0 protein of cotton leafroll dwarf virus-atypical isolate is a weak RNA silencing suppressor and the avirulence determinant that breaks the cotton Cbd gene-based resistance

Plant Pathology, 1059–1071, 2019. | DOI : 10.1111/ppa.13031

TOMKOVA D. and BERR A.

Book Review: Epigenetics in Plants of Agronomic Importance: Fundamentals and Applications

Frontiers in Plant Science, 10:882, 2019. | DOI : 10.3389/fpls.2019.00882

MATVEEVA T. and OTTEN L.

Widespread occurence of natural genetic transformation of plants by Agrobacterium

Plant Molecular Biology, 10.1007/s11103-019-00913-y, 2019. | DOI : 10.1007/s11103-019-00913-y

LANGE H., NDECKY S., GOMEZ-DIAZ C., PFLIEGER D., BUTEL N., ZUMSTEG J., KUHN L., PIERMARIA C., CHICHER J., CHRISTIE M., KARAASLAN E.S., LANG P.L., WEIGEL D., VAUCHERET H., HAMMANN P. and GAGLIARDI D.

RST1 and RIPR connect the cytosolic RNA exosome to the Ski complex in Arabidopsis

Nature Communications, 10:3871, 2019. | DOI : 10.1038/s41467-019-11807-4

BOUCHOUCHA A., WALTZ F., BONNARD G., ARRIVÉ M., HAMMANN P., KUHN L., SCHELCHER C., ZUBER H., GOBERT A. and GIEGÉ P.

Determination of protein-only RNase P interactome in Arabidopsis mitochondria and chloroplasts identifies a complex between PRORP1 and another NYN domain nuclease

Plant Journal, 100(3):549-561, 2019. | DOI : 10.1111/tpj.14458

GIEGÉ P. and MARÉCHAL-DROUARD L.

IUBMB Life Special Issue on tRNA Biology

IUBMB Life, 71, 1064-1065, 2019. | DOI : doi: 10.1002/iub.2119

GOBERT A., BRUGGEMAN M. and GIEGÉ P.

Involvement of PIN-like domain nucleases in tRNA processing and translation regulation.

IUBMB Life, 71, 1117-1125, 2019. | DOI : 10.1002/iub.2062

HUANG Y., JIANG L., LIU B.Y., TAN C.F., CHEN D.H., SHEN W.H. and RUAN Y.

Evolution and conservation of Polycomb Repressive Complex 1 core components and putative associated factors in the green lineage

BMC Genomics, 20:533, 2019. | DOI : 10.1186/s12864-019-5905-9

VARRÉ J.S., D’AGOSTINO N., TOUZET P., GALLINA S., TAMBURINO R., CANTARELLA C., UBRIG E., CARDI T., DROUARD L., GUALBERTO J.M. and SCOTTI N.

Complete Sequence, Multichromosomal Architecture and Transcriptome Analysis of the Solanum tuberosum Mitochondrial Genome

International Journal of Molecular Sciences, 20:4788, 2019. | DOI : 10.3390/ijms20194788

BLEVINS T., PODICHETI R. and PIKAARD C.S.

Analysis of siRNA precursors generated by RNA polymerase IV and RNA-dependent RNA Polymerase 2 in Arabidopsis

In: Julia Chekanova and Hsiao-Lin Wang (ed) Plant Long Non-Coding RNAs. Methods in Molecular Biology, vol 1993. Springer., 2019. | DOI : 10.1007/978-1-4939-9045-0_2

BASSARD J.E. and LAURSEN T.

Molecular snapshots of dynamic membrane-bound metabolons

In: Claudia Schmidt-Dannert, Maureen B. Quin (eds) Metabolons and Supramolecular Enzyme Assemblies, chapter 1. Elsevier., 2019. | DOI : https://doi.org/10.1016/bs.mie.2018.12.001

HEMMERLIN A., HUCHELMANN A., TRITSCH D., SCHALLER H. and BACH T.J.

The specific molecular architecture of plant 3-hydroxy-3-methylglutaryl-CoA lyase

Journal of Biological Chemistry, 294(44):16186-16197, 2019. | DOI : 10.1074/jbc.RA119.008839

HEITZ T., SMIRNOVA E., MARQUIS V. and POIRIER L.

Metabolic control within the jasmonate biochemical pathway

Plant and Cell Physiology, pcz172, 2019. | DOI : 10.1093/pcp/pcz172

HAZMAN M., SÜHNEL M., SCHÄFER S., ZUMSTEG J., LESOT A., BELTRAN F., MARQUIS V., HERRGOTT L., MIESCH L., RIEMANN M. and HEITZ T.

Characterization of Jasmonoyl-Isoleucine (JA-Ile) Hormonal Catabolic Pathways in Rice upon Wounding and Salt Stress

Rice, 45, 2019. | DOI : 10.1186/s12284-019-0303-0

MICHAELI S.

The viral F-box protein P0 induces an ER-derived autophagy degradation pathway for the clearance of membrane-bound AGO1.

Proceedings of the National Academy of Sciences of the United States of America, 10, 2019. | DOI : 10.1073/pnas.1912222116

VILLETTE C., MAURER L., DELECOLLE J., ZUMSTEG J., ERHARDT M. and HEINTZ D.

In situ localization of micropollutants and associated stress response in Populus nigra leaves

Environment International, 126:523-532, 2019. | DOI : https://www.ncbi.nlm.nih.gov/pubmed/30851483

GAMPER C., SPENLÉ C., BOSCÁ S., VAN DER HEYDEN M., ERHARDT M., OREND G., BAGNARD D. and HEINLEIN M.

Functionalized Tobacco mosaic virus Coat Protein Monomers and Oligomers as Nanocarriers for Anti-Cancer Peptides

Cancers, 11:1609, 2019. | DOI : 10.3390/cancers11101609

GRAINDORGE S., COGNAT V., JOHANN TO BERENS P., MUTTERER J. and MOLINIER J.

Photodamage repair pathways contribute to the accurate maintenance of the DNA methylome landscape upon UV exposure

PLoS Genetics, 15(11):e1008476, 2019. | DOI : 10.1371/journal.pgen.1008476

CHEN D.H., WANG Q., FENG J., RUAN Y. and SHEN W.H.

Arabidopsis ZUOTIN RELATED FACTOR1 Proteins Are Required for Proper Embryonic and Post-Embryonic Root Development

Frontiers in Plant Science, 10:1498, 2019. | DOI : doi.org/10.3389/fpls.2019.01498

VILLETTE C., MAURER L., WANKO A. and HEINTZ D.

Xenobiotics metabolization in Salix alba leaves uncovered by mass spectrometry imaging

Metabolomics, 15(122), 2019. | DOI : https://doi.org/10.1007/s11306-019-1572-8

GALLEGO A., ROJAS L.F., RODRIGUEZ H.A., MORA C., ATEHORTUA L., URREA A.I., GUILTINAN M.J., MAXIMOVA S.N., GAQUEREL E., ZULUAGA M. and PABON-MORA N.

Metabolomic profile of cacao cell suspensions growing in blue light/dark conditions with potential in food biotechnology

Plant Cell, Tissue and Organ Culture, 1-20, 2019. | DOI : https://doi.org/10.1007/s11240-019-01679-

BOACHON B., BURDLOFF Y., RUAN J.X., ROJO R., JUNKER R.R., VINCENT B., NICOLÈ F., BRINGEL F., LESOT A., HENRY L., BASSARD J.E., MATHIEU S., ALLOUCHE L., KAPLAN I., DUDAREVA N., VUILLEUMIER S., MIESCH L., ANDRE F., NAVROT N., CHEN X.Y. and WERCK D.

A Promiscuous CYP706A3 Reduces Terpene Volatile Emission from Arabidopsis Flowers, Affecting Florivores and the Floral Microbiome

Plant Cell, 31(12):2947-2972, 2019. | DOI : 10.1105/tpc.19.00320

THOLE V., BASSARD J.E., RAMÍREZ-GONZÁLEZ R., TRICK M., GHASEMI AFSHAR B., BREITEL D., HILL L., FOITO A., SHEPHERD L., FREITAG S., NUNES DOS SANTOS C., MENEZES R., BAÑADOS P., NAESBY M., WANG L., SOROKIN A., TIKHONOVA O., SHELENGA T., STEWART D., VAIN P. and MARTIN C.

RNA-seq, de novo transcriptome assembly and flavonoid gene analysis in 13 wild and cultivated berry fruit species with high content of phenolics

BMC Genomics, 20, 2019. | DOI : doi:10.1186/s12864-019-6183-2

BELLOTT L., GILMER D. and MICHEL F.

Hit two birds with one stone: the multiple properties of (viral) RNA silencing suppressors

Virologie, 23(6):335-58, 2019. | DOI : 10.1684/vir.2019.0797

CAMUT L., REGNAULT T., SIRLIN-JOSSERAND M., ACHARD L., CARRERA E., ZUMSTEG J., HEINTZ D., LEONHARDT N., JOÃO PIMENTA LANGE M., DAVIÈRE J.M. and ACHARD P.

Root-derived GA12 contributes to temperature-induced shoot growth in Arabidopsis

Nature Plants, 5:1216-1221, 2019. | DOI : https://doi.org/10.1038/s41477-019-0568-8

SUNTICHAIKAMOLKUL N., TANTISUWANICHKUL K., PROMBUTARA P., KOBTRAKUL K., ZUMSTEG J., WANNACHART S., SCHALLER H., YAMAZAKI M., SAITO K., DE-EKNAMKUL W., VIMOLMANGKANG S. and SIRIKANTARAMAS S.

Transcriptome analysis of Pueraria candollei var. mirifica for gene discovery in the biosyntheses of isoflavones and miroestrol

BMC Plant Biology, 581, 2019. | DOI : https://doi.org/10.1186/s12870-019-2205-0

BELVAL L., MARMONIER A., SCHMITT-KEICHINGER C., GERSCH S., ANDRET-LINK P., KOMAR V., VIGNE E., LEMAIRE O., RITZENTHALER C. and DEMANGEAT G.

From a Movement-Deficient Grapevine Fanleaf Virus to the Identification of a New Viral Determinant of Nematode Transmission

Viruses, 1146, 2019. | DOI : doi.org/10.3390/v11121146

BERTHOLD F., ROUJOL D., HEMMER C., JAMET E., RITZENTHALER C., HOFFMANN L. and SCHMITT-KEICHINGER C.

Inside or outside? A new collection of Gateway vectors allowing plant protein subcellular localization or over-expression

Plasmid, 102436, 2019. | DOI : doi.org/10.1016/j.plasmid.2019.102436

GILMER D. and OGLIASTRO M.

Compte rendu des 17es Rencontres de virologie végétale

Virologie, 23(2):45-49, 2019. | DOI : 10.1684/vir.2019.0767

BELLOTT L., MICHEL F. and GILMER D.

D’une pierre deux coups : les multiples caractéristiques des suppresseurs (viraux) de l’interférence par l’ARN

Virologie, 23(6):335-358, 2019. | DOI : 10.1684/vir.2019.0797

KEKEZ M.

Arabidopsis seryl-tRNA synthetase: the first crystal structure and novel protein interactor of plant aminoacyl-tRNA synthetase

FEBS Journal, 286(3), 2019. | DOI : 10.1111/febs.14735

KEKEZ M., ZANKI V., KEKEZ I., BARANASIC J., HODNIK V., DUCHÊNE A.M., ANDERLUH G., GRUIC-SOVULJ I., MATKOVIĆ-ČALOGOVIĆ D., WEYGAND-DURASEVIC I. and ROKOV-PLAVEC J.

Arabidopsis seryl-tRNA synthetase: the first crystal structure and novel protein interactor of plant aminoacyl-tRNA synthetase.

FEBS Journal, 286(3):536-554, 2019. | DOI : doi: 10.1111/febs.14735

RYABOVA L., ROBAGLIA C. and MEYER C.

Target of Rapamycin kinase: central regulatory hub for plant growth and metabolism.

Journal of Experimental Botany, 6, 2019.

MICHAELI S., CLAVEL M., LECHNER E., VIOTTI C., WU J., DUBOIS M., HACQUARD T., DERRIEN B., IZQUIERDO E., LECORBEILLER M., BOUTEILLER N., DE CILIA J., ZIEGLER-GRAFF V., VAUCHERET H., GALILI G. and GENSCHIK P.

The viral F-box protein P0 induces an ER-derived autophagy degradation pathway for the clearance of membrane-bound AGO1

Proceedings of the National Academy of Sciences of the United States of America, 116(45):22872-22883, 2019. | DOI : 10.1073/pnas.1912222116

JULIAN J., COEGO A., LOZANO-JUSTE J., LECHNER E., WU Q., ZHANG X., MERILO E., BELDA-PALAZON B., PARK S.Y., CUTLER S.R., AN C., GENSCHIK P. and RODRIGUEZ P.L.

The MATH-BTB BPM3 and BPM5 subunits of Cullin3-RING E3 ubiquitin ligases target PP2CA and other clade A PP2Cs for degradation

Proceedings of the National Academy of Sciences of the United States of America, 15725-15734, 2019. | DOI : 10.1073/pnas.1908677116

TROLET A., BALDRICH P., CRIQUI M.C., DUBOIS M., CLAVEL M., MEYERS B.C. and GENSCHIK P.

Cell Cycle-Dependent Regulation and Function of ARGONAUTE1 in Plants

Plant Cell, 1734-1750, 2019. | DOI : 10.1105/tpc.19.00069

ŠKILJAICA A., LECHNER E., JAGIĆ M., MAJSEC K., MALENICA N., GENSCHIK P. and BAUER N.

The protein turnover of Arabidopsis BPM1 is involved in regulation of flowering time and abiotic stress response

Plant Molecular Biology, , 2019.

GENSCHIK P.

RPN10: A Case Study for Ubiquitin Binding Proteins and More

Plant Cell, , 2019.

VASEVA I., QUDEIMAT E., POTUSCHAK T., DU Y., GENSCHIK P., VANDENBUSSCHE F. and VAN DER STRAETEN D.

The plant hormone ethylene restricts Arabidopsis growth via the epidermis

Proceedings of the National Academy of Sciences of the United States of America, E4130-E4139, 2018. | DOI : 10.1073/pnas.1717649115

NGONDO P., CIRERA-SALINAS D., YU J., WISCHNEWSKI H., BODAK M., VANDORMAEL-POUMIN S., GEISELMAN A., WETTSTEIN R., LUITZ J., COHEN-TANNOUDJI M. and CIAUDO C.

Argonaute 2 is required for extra-embryonic endoderm differentiation of mouse embryonic stem cells.

Stem Cell Reports, 10(2):461-476, 2018. | DOI : 10.1016/j.stemcr.2017.12.023

SHCHEPETILNIKOV M. and RYABOVA L.

Recent Discoveries on the Role of TOR (Target of Rapamycin) Signaling in Translation in Plants

Plant Physiology, 176(2):1095–1105, 2018. | DOI : 10.1104/pp.17.01243

PENG M., LI Z., ZHOU N., MA M., JIANG Y., DONG A., SHEN W.H. and LI L.

Linking PHYTOCHROME-INTERACTING FACTOR to histone modification in plant shade avoidance

Plant Physiology, 176:1341-1351, 2018. | DOI : 10.1104/pp.17.01189

NIEHL A., SOININEN M., PORANEN M.M. and HEINLEIN M.

Synthetic biology approach for plant protection using dsRNA.

Plant Biotechnology Journal, 16:1679-1687, 2018. | DOI : 10.1111/pbi.12904

HEMMER C., DJENNANE S., ACKERER L., HLEIBIEH K., MARMONIER A., GERSCH S., GARCIA S., VIGNE E., KOMAR V., PERRIN M., GERTZ C., BELVAL L., BERTHOLD F., MONSION B., KEICHINGER C., LEMAIRE O., LORBER B., GUTIÉRREZ C., MUYLDERMANS S., DEMANGEAT G. and RITZENTHALER C.

Nanobody-mediated resistance to Grapevine fanleaf virus in plants

Plant Biotechnology Journal, 16(2):660-671, 2018. | DOI : 10.1111/pbi.12819

BASTET A., LEDERER B., GIOVINAZZO N., ARNOUX X., GERMAN-RETANA S., REINBOLD C., BRAULT V., GARCIA D., DJENNANE S., GERSCH S., LEMAIRE O., ROBAGLIA C. and GALLOIS J.L.

Trans-species synthetic gene design allows resistance pyramiding and broad-spectrum engineering of virus resistance in plants.

Plant Biotechnology Journal, 1-13, 2018. | DOI : 10.1111/pbi.12896

JIANG L., LI D., JIN L., RUAN Y., SHEN W.H. and LIU C.

Histone lysine methyltransferases BnaSDG8.A and BnaSDG8.C are involved in the floral transition in Brassica napus

Plant Journal, 95:672-685, 2018. | DOI : 10.1111/tpj.13978

MA J., LIU Y., ZHOU W., ZHU Y., DONG A. and SHEN W.H.

Histone chaperones play crucial roles in maintenance of stem cell niche during plant root development

Plant Journal, 95:86-100, 2018. | DOI : 10.1111/tpj.13933

CHICOIS C., SCHEER H., GARCIA S., ZUBER H., MUTTERER J., CHICHER J., HAMMANN P., GAGLIARDI D. and GARCIA D.

The UPF1 interactome reveals interaction networks between RNA degradation and translation repression factors in Arabidopsis

Plant Journal, 96:119-132, 2018. | DOI : 10.1111/tpj.14022

GILMER D., RATTI C. and MICHEL F.

Long-distance movement of helical multipartite phytoviruses: keep connected or die?

Current Opinion in Virology, 33:120-128, 2018.

VILLETTE C., ZUMSTEG J., SCHALLER H. and HEINTZ D.

Non-targeted metabolic profiling of BW312 Hordeum vulgare semi dwarf mutant using UHPLC coupled to QTOF high resolution mass spectrometry.

Scientific Reports, 8(1):13178, 2018. | DOI : 10.1038/s41598-018-31593-1

DE ALMEIDA C., SCHEER H., ZUBER H. and GAGLIARDI D.

RNA uridylation: a key post-transcriptional modification shaping the coding and non-coding transcriptome

Wiley Interdisciplinary Reviews: RNA, 9(1):e1440, 2018. | DOI : 10.1002/wrna.1440

PENG L., WANG L., ZHANG Y., DONG A., SHEN W.H. and HUANG Y.

Structural analysis of the Arabidopsis AL2-PAL and PRC1 complex provides mechanistic insight about active-to-repressive chromatin state switch

Journal of Molecular Biology, 430:4245-4259, 2018. | DOI : 10.1016/j.jmb.2018.08.021

INCARBONE M., RITZENTHALER C. and DUNOYER P.

Peroxisomal targeting as a sensitive tool to detect protein-small RNA interactions through in vivo piggybacking

Frontiers in Plant Science, 9:1-13, 2018.

MONSION B., INCARBONE M., HLEIBIEH K., POIGNAVENT V., GHANNAM A., DUNOYER P., DAEFFLER L., TILSNER J. and RITZENTHALER C.

Efficient detection of long dsRNA in vitro and in vivo using the dsRNA binding domain from FHV B2 protein

Frontiers in Plant Science, 9:1-16, 2018.

GIL J.F., LIEBE S., THIEL H., LENNEFORS B.L., KRAFT T., GILMER D., MAISS E., VARRELMANN M. and SAVENKOV E.I.

Massive up-regulation of LBD transcription factors and EXPANSINs highlights the regulatory programs of rhizomania disease

Molecular Plant Pathology, doi:10.1111/mpp.12702, 2018. | DOI : 10.1111/mpp.12702

POOGGIN M. and RYABOVA L.

Ribosome Shunting, Polycistronic Translation, and Evasion of Antiviral Defenses in Plant Pararetroviruses and Beyond.

Frontiers in Microbiology, 9:644, 2018. | DOI : 10.3389/fmicb.2018.00644

LI C., LIU Y., SHEN W.H., YU Y. and DONG A.

Chromatin-remodeling factor OsINO80 is involved in regulation of gibberellin biosynthesis and is crucial for rice plant growth and development

Journal of Integrative Plant Biology, 60:144-159, 2018. | DOI : 10.1111/jipb.12603

FLOBINUS A., CHEVIGNY N., CHARLEY P., SEISSLER T., KLEIN E., BLEYKASTEN-GROSSHANS C., RATTI C., BOUZOUBAA S.E., WILUSZ J. and GILMER D.

Beet Necrotic Yellow Vein Virus Noncoding RNA Production Depends on a 5' to 3' Xrn Exoribonuclease Activity

Viruses, 10(3):137, 2018. | DOI : 10.3390/v10030137

BRADAI M., MAHJOUBI H., CHINI A., CHABOUTÉ M.E., HANIN M. and EBEL C.

Genome wide identification of wheat and Brachypodium type one protein phosphatases and functional characterization of durum wheat TdPP1a.

PLoS ONE, e0191272, 2018. | DOI : 10.1371/journal.pone.0191272

ILC T., ARISTA G., TAVARES R., NAVROT N., DUCHENE E., VELT A., CHOULET F., PAUX E., FISCHER M., NELSON D.R., HUGUENEY P., WERCK D. and RUSTENHOLZ C.

Annotation, classification, genomic organization and expression of the Vitis vinifera CYPome

PLoS ONE, e0199902, 2018. | DOI : 10.1371/journal.pone.0199902

LAUFER M., MOHAMMAD H., MAISS E., RICHERT-PÖGGELER K., DALL'ARA M., RATTI C., GILMER D. and VARRELMANN M.

Biological properties of Beet soil-borne mosaic virus and Beet necrotic yellow vein virus cDNA clones produced by isothermal in vitro recombination: Insights for reassortant appearance

Virology, 518:25-33, 2018.

MAHJOUBI H., TAMARI Y., TAKEDA S., BOUCHABKÉ-COUSSA O., HANIN M., HERZOG E., SCHMIT A.C., CHABOUTÉ M.E. and EBEL C.

The wheat TdRL1 is the functional homolog of the rice RSS1 and promotes plant salt stress tolerance.

Plant Cell Reports, 1625-1637, 2018. | DOI : 10.1007/s00299-018-2333-2

ARSÈNE-PLOETZE F., CHIBOUB O., LIÈVREMONT D., FARASIN J., FREEL K.C., FOUTEAU S. and BARBE V.

Adaptation in toxic environments: comparative genomics of loci carrying antibiotic resistance genes derived from acid mine drainage waters

Environmental Science and Pollution Research, 25(2):1470-1483, 2018. | DOI : 10.1007/s11356-017-0535-8

LEMAIRE O., DEMANGEAT G., DJENNANE S., HILY J.M., HEMMER C. and RITZENTHALER C.

Les biotechnologies au secours de nos vignobles

Revue des Oenologues, 166:24-26, 2018.

KØRNER C.J., PITZALIS N., PEÑA E.J., ERHARDT M., VAZQUEZ F. and HEINLEIN M.

Crosstalk between PTGS and TGS pathways in natural antiviral immunity and disease recovery

Nature Plants, 4:157-164, 2018. | DOI : 10.1038/s41477-018-0117-x

GILMER D.

Offre de formation en virologie moléculaire, Université de Strasbourg

Virologie, 22(4):226-228, 2018.

ZUBER H., SCHEER H., JOLY A.C. and GAGLIARDI D.

Respective contributions of URT1 and HESO1 to the uridylation of 5’ fragments produced from RISC-cleaved mRNAs

Frontiers in Plant Science, 9(1438), 2018. | DOI : 10.3389/fpls.2018.01438

DE ALMEIDA C., SCHEER H., GOBERT A., FILECCIA V., MARTINELLI F., ZUBER H. and GAGLIARDI D.

RNA uridylation and decay in plants

Philosophical Transactions of the Royal Society B: Biological Sciences, , 2018. | DOI : 10.1098/rstb.2018.0163

GAGLIARDI D. and DZIEMBOWSKI A.

5' and 3' modifications controlling RNA degradation: from safeguards to executioners

Philosophical Transactions of the Royal Society B: Biological Sciences, , 2018. | DOI : 10.1098/rstb.2018.0160

NUEL M., LAURENT J., BOIS P., HEINTZ D. and WANKO A.

Seasonal and ageing effect on the behaviour of 86 drugs in a full -scale surface treatment wetland : Removal efficiencies and distribution in plants and sediments

Science of the Total Environment, 615(15):1099-1109, 2018. | DOI : 10.1016/j.scitotenv.2017.10.061

ROBLES LUNA G., PEÑA E.J., BORNIEGO B., HEINLEIN M. and GARCIA M.L.

Citrus psorosis virus movement protein contains an aspartic protease required for autocleavage and the formation of tubule-like structures at plasmodesmata.

Journal of Virology, 92:e00355-18, 2018. | DOI : 10.1128/JVI.00355-18

WANG Q. and SHEN W.H.

Chromatin Modulation and Gene Regulation in Plants: Insight about PRC1 Function

Biochemical Society Transactions, 46:957-966, 2018. | DOI : 10.1042/BST20170576

LE RET M., BELCHER S., GRAINDORGE S., WALLET C., KOECHLER S., ERHARDT M., WILLIAMS-CARRIER R., BARKAN A. and GUALBERTO J.M.

An organellar thymidine kinase is required for the efficient replication of the maize plastidial genome.

Plant Physiology, 178:1643-1656, 2018. | DOI : 10.1104/pp.18.00976

DERRIEN B., CLAVEL M., BAUMBERGER N., IKI T., SARAZIN A., HACQUARD T., ZIEGLER-GRAFF V., VAUCHERET H., MICOL J.L., VOINNET O. and GENSCHIK P.

A Suppressor Screen for AGO1 Degradation by the Viral F-Box P0 Protein Uncovers a Role for AGO DUF1785 in sRNA Duplex Unwinding.

Plant Cell, 1353-1374., 2018. | DOI : 10.1105/tpc.18.00111

DUBOIS M., SELDEN K., BEDIEE A., ROLLAND G., BAUMBERGER N., NOIR S., BACH L., LAMY G., GRANIER C. and GENSCHIK P.

SIAMESE-RELATED1 Is Regulated Posttranslationally and Participates in Repression of Leaf Growth under Moderate Drought.

Plant Physiology, 2834-2850, 2018.

GLÖCKLE B., URBAN W.J., NAGAHARA S., ANDERSEN E.D., HIGASHIYAMA T., GRINI P.E. and SCHNITTGER A.

Pollen differentiation as well as pollen tube guidance and discharge are independent of the presence of gametes.

Development, 8:145, 2018. | DOI : 10.1242/dev.152645

SCHUMAN M., MELDAU S., GAQUEREL E., DIEZEL C., MCGALE E., GREENFIELD S. and BALDWIN I.T.

The active jasmonate JA-ILE regulates a specific subset of plant jasmonate-mediated resistance to herbivores in nature

Frontiers in Plant Science, , 2018.

BORTOLAMIOL-BÉCET D., MONSION B., CHAPUIS S., HLEIBIEH K., SCHEIDECKER D., ALIOUA A., BOGAERT F., REVERS F., BRAULT V. and ZIEGLER-GRAFF V.

Phloem-triggered virus-induced gene silencing using a recombinant polerovirus

Frontiers in Microbiology, 9:2449, 2018. | DOI : 10.3389/fmicb.2018.02449

PETERS K., WORRICH A., WEINHOLD A., ALKA O., BALCKE G., BIRKEMEYER C., BRUELHEIDE H., CALF O., DIETZ S., DÜHRKOP K., GAQUEREL E., HEINING U., KÜCKLICH M., MACEL M., MÜLLER C., POESCHL Y., POHNERT G., RISTOK C., RODRÍGUEZ V., RUTTKIES C., SCHUMAN M., SCHWEIGER R., SHAHAF N., STEINBECK C., TORTOSA M., TREUTLER H., UEBERSCHAAR N., VELASCO P., WEISS B., WIDDIG A., NEUMANN S. and VAN DAM N.

Current challenges in plant eco-metabolomics

International Journal of Molecular Sciences, 1385, 2018.

CLAUDEL P., CHESNAIS Q., FOUCHÉ Q., KRIEGER C., HALTER D., BOGAERT F., MEYER S., BOISSINOT S., HUGUENEY P., ZIEGLER-GRAFF V., AMELINE A. and BRAULT V.

The aphid-transmitted Turnip yellows virus differentially affects volatiles emission and subsequent vector behavior in two Brassicaceae plants

International Journal of Molecular Sciences, 19(8):2316, 2018. | DOI : 10.3390/ijms19082316

FELIPO BENAVENT A., URBEZ C., BLANCO-TOURINAN N., SERRANO-MISLATA A., BAUMBERGER N., ACHARD P., AGUSTI J., BLAZQUEZ M.A. and ALABADI D.

Regulation of xylem fibers differentiation by gibberellins through DELLA-KNAT1 interaction

Development, 145:145: dev164962, 2018. | DOI : 10.1242/dev.164962

SILVESTRO D., VILLETTE C., DELECOLLE J., OLSEN C.E., MOTAWIA M.S., GEOFFROY P., MIESCH M., JENSEN P.E., HEINTZ D. and SCHALLER H.

Vitamin D5 in Arabidopsis thaliana

Scientific Reports, 8(1):16348, 2018. | DOI : 10.1038/s41598-018-34775-z

BASSARD J.E. and HALKIER B.A.

How to prove the existence of metabolons?

Phytochemistry Reviews, 211–227, 2018. | DOI : 10.1007/s11101-017-9509-1

MONTAVON T., KWON Y., ZIMMERMANN A., HAMMANN P., VINCENT T., COGNAT V., BERGDOLL M., MICHEL F. and DUNOYER P.

Characterization of DCL4 missense alleles provides insights into its ability to process distinct classes of dsRNA substrates.

Plant Journal, 95(2):204-218, 2018. | DOI : doi: 10.1111/tpj.13941

SAULNIER A., GILMER D. and TORDO N.

Societe francaise de virologie ou en sommes nous deux ans apres

Virologie, 22(6):269-271, 2018.

CHEN K., DE BORNE F., SIERRO N., IVANOV N., ALIOUA A., KOECHLER S. and OTTEN L.

Organization of the TC and TE cellular T-DNA regions in Nicotiana otophora and functional analysis of three diverged TE-6b genes

Plant Journal, 94:274-287, 2018. | DOI : 10.1111/tpj.13853

OTTEN L.

The Agrobacterium Phenotypic Plasticity (Plast) Genes.

Current Topics in Microbiology and Immunology, 375-419, 2018. | DOI : 10.1007/82_2018_93

ROMÃO E., POIGNAVENT V., VINCKE C., RITZENTHALER C., MUYLDERMANS S. and MONSION B.

Construction of High-Quality Camel Immune Antibody Libraries

In: Springer New York (ed) Methods in Molecular Biology, vol 1701. Michael Hust and Theam Soon Lim., 2018. | DOI : 10.1007/978-1-4939-7447-4_9

DONG L., POLLIER J., BASSARD J.E., NTALLAS G., ALMEIDA A., LAZARIDI E., KHAKIMOV B., ARENDT P., DE OLIVEIRA L.S., LOTA F., GOOSSENS A., MICHOUX F. and BAK S.

Co-expression of Squalene Epoxidases With Triterpene Cyclases Boosts Production of Triterpenoids in Plants and Yeast

Metabolic Engineering, 49:1-12, 2018. | DOI : 10.1016/j.ymben.2018.07.002

ALMEIDA A., DONG L., KHAKIMOV B., BASSARD J.E., MOSES T., LOTA F., GOOSSENS A., APPENDINO G. and BAK S.

A Single Oxidosqualene Cyclase Produces the Seco-Triterpenoid α-Onocerin

Plant Physiology, 176(2):1469-1484, 2018. | DOI : 10.1104/pp.17.01369

DUDNIK A., ALMEIDA A.F., ANDRADE R., AVILA B., BAÑADOS P., BARBAY D., BASSARD J.E., BENKOULOUCHE M., BOTT M., BRAGA A., BREITEL D., BRENNAN R., BULTEAU L., CHANFORAN C., COSTA I., COSTA R.S., DOOSTMOHAMMADI M., FARIA N., FENG C., FERNANDES A., FERREIRA P., FERRO R., FOITO A., FREITAG S., GARCIA G., GASPAR P., GODINHO-PEREIRA J., HAMBERGER B., HARTMANN A., HEIDER H., JARDIM C., JULIEN-LAFERRIERE A., KALLSCHEUER N., KERBE W., KUIPERS O.P., LI S., LOVE N., MARCHETTI-SPACCAMELA A., MARIENHAGEN J., MARTIN C., MARY A., MAZUREK V., MEINHART C., SEVILLANO D.M., MENEZES R., NAESBY M., NØRHOLM M.H.H., OKKELS F.T., OLIVEIRA J., OTTENS M., PARROT D., PEI L., ROCHA I., ROSADO-RAMOS R., ROUSSEAU C., SAGOT M.F., DOS SANTOS C.N., SCHMIDT M., SHELENGA T., SHEPHERD L., SILVA A.R., DA SILVA M.H., SIMON O., STAHLHUT S.G., SOLOPOVA A., SOROKIN A., STEWART D., STOUGIE L., SU S., THOLE V., TIKHONOVA O., TRICK M., VAIN P., VERÍSSIMO A., VILA-SANTA A., VINGA S., VOGT M., WANG L., WANG L., WEI W., YOUSSEF S., NEVES A.R. and FORSTER J.

BacHBerry: BACterial Hosts for production of Bioactive phenolics from bERRY fruits

Phytochemistry Reviews, 17:291–326, 2018. | DOI : doi.org/10.1007/s11101-017-9532-2

GUALBERTO J.M. and NEWTON K.J.

Plant Mitochondrial Genomes: Dynamics and Mechanisms of Mutation

Annual Review of Plant Biology, 68:225-252, 2017. | DOI : 10.1146/annurev-arplant-043015-112232

SMERTENKO A., ASSAAD F., BALUSKA F., BEZANILLA M., BUSCHMANN H., VAN DAMME D., DRAKAKAKI G., HAUSER M.T., JANSON M., MINEYUKI Y., MOORE I., MÜLLER S., MURATA T., OTEGUI M.S., PANTERIS E., RASMUSSEN C., SCHMIT A.C., ŠAMAJ J., SAMUELS L., STAEHELIN A., WASTENEYS G. and ŽÁRSKÝ V.

Plant cytokinesis: terminology for structures and processes

Trends in Cell Biology, 1-23, 2017.

RENAULT H., DE MAROTHY M., JONASSON G., LARA P., NELSON D.R., NILSSON I., ANDRE F., VON HEIJNE G. and WERCK-REICHHART D.

Gene duplication leads to altered membrane topology of a cytochrome P450 enzyme in seed plants

Molecular Biology and Evolution, 34(8):2041-2056, 2017. | DOI : 10.1093/molbev/msx160

RENAULT H., ALBER A., HORST N.A., BASILIO LOPES A., FICH E.A., KRIEGSHAUSER L., WIEDEMANN G., ULLMANN P., HERRGOTT L., ERHARDT M., PINEAU E., EHLTING J., SCHMITT M., ROSE J.K., RESKI R. and WERCK D.

A phenol-enriched cuticle is ancestral to lignin evolution in land plants

Nature Communications, 8:14713, 2017. | DOI : 10.1038/ncomms14713

SIKORSKA N., ZUBER H., GOBERT A., LANGE H. and GAGLIARDI D.

RNA degradation by the plant RNA exosome involves both phosphorolytic and hydrolytic activities

Nature Communications, 8:2162, 2017. | DOI : 10.1038/s41467-017-02066-2

CIRERA-SALINAS D., YU J., BODAK M., NGONDO P., HERBERT K.M. and CIAUDO C.

Noncanonical function of DGCR8 controls mESC exit from pluripotency

Journal of Cell Biology, 216(2):355, 2017. | DOI : 10.1083/jcb.201606073

SHCHEPETILNIKOV M., MAKARIAN J., SROUR O., GELDREICH A., YANG Z., CHICHER J., HAMMANN P. and RYABOVA L.

GTPase ROP2 binds and promotes activation of target of rapamycin, TOR, in response to auxin

EMBO Journal, 36:886-903, 2017. | DOI : 10.15252/embj.201694816

BLEVINS T., WANG J., PFLIEGER D., PONTVIANNE F. and PIKAARD C.S.

Hybrid incompatibility caused by an epiallele

Proceedings of the National Academy of Sciences of the United States of America, 114(14):3702-3707, 2017. | DOI : 10.1073/pnas.1700368114

SCHALK C., COGNAT V., GRAINDORGE S., VINCENT T., VOINNET O. and MOLINIER J.

Small RNA-mediated repair of UV-induced DNA lesions by the DNA DAMAGE BINDING protein 2 and ARGONAUTE 1

Proceedings of the National Academy of Sciences of the United States of America, , 2017. | DOI : 10.1073/pnas.1618834114

MONTAVON T., KWON Y., ZIMMERMANN A., HAMMANN P., VINCENT T., COGNAT V., MICHEL F. and DUNOYER P.

A specific dsRNA-binding protein complex selectively sequesters endogenous inverted-repeat siRNA precursors and inhibits their processing

Nucleic Acids Research, 45(3):1330-1344, 2017. | DOI : 10.1093/nar/gkw1264

SALINAS-GIEGÉ T., CAVAIUOLO M., COGNAT V., UBRIG E., REMACLE C., DUCHÊNE A.M., VALLON O. and MARÉCHAL-DROUARD L.

Polycytidylation of mitochondrial mRNAs in Chlamydomonas reinhardtii

Nucleic Acids Research, 45(22):12963-12973, 2017. | DOI : 10.1093/nar/gkx903

ZHU Y., RONG L., LUO Q., WANG B., ZHOU N., YANG Y., ZHANG C., FENG H., ZHENG L., SHEN W.H., MA J. and DONG A.

The Histone Chaperone NRP1 Interactsd with WEREWOLF to Activate GLABRA2 in Arabidopsis Root Hair Development

Plant Cell, 29:260-276, 2017. | DOI : 10.1105/tpc.16.00719

PASZKIEWICZ G., GUALBERTO J.M., BENAMAR A., MACHEREL D. and LOGAN D.C.

Arabidopsis Seed Mitochondria Are Bioenergetically Active Immediately upon Imbibition and Specialize via Biogenesis in Preparation for Autotrophic Growth

Plant Cell, 29:109-128, 2017. | DOI : 10.1105/tpc.16.00700

LIU K., YU Y., DONG A. and SHEN W.H.

SET DOMAIN GROUP701 encodes a H3K4-methytransferase and regulates multiple key processes of rice plant development

New Phytologist, 215:609-623, 2017. | DOI : 10.1111/nph.14596

PINEAU E., XU L., RENAULT H., TROLET A., NAVROT N., ULLMANN P., LÉGERET B., VERDIER G., BEISSON F. and PINOT F.

Arabidopsis thaliana EPOXIDE HYDROLASE1 (AtEH1) is a cytosolic epoxide hydrolase involved in the synthesis of poly-hydroxylated cutin monomers

New Phytologist, 215(1):173-186, 2017. | DOI : 28497532

ILC T., HALTER D., MIESCH L., LAUVOISARD F., KRIEGSHAUSER L., ILG A., BALTENWECK R., HUGUENEY P., WERCK D., DUCHÊNE E. and NAVROT N.

A grapevine cytochrome P450 generates the precursor of wine lactone, a key odorant in wine

New Phytologist, 213(1):264-274, 2017. | DOI : 10.1111/nph.14139

SMIRNOVA E., MARQUIS V., POIRIER L., AUBERT Y., ZUMSTEG J., MENARD R., MIESCH L. and HEITZ T.

Jasmonic Acid Oxidase 2 (JAO2) hydroxylates jasmonic acid and represses basal defense and resistance responses against Botrytis cinerea infection

Molecular Plant, 10(9):1159-1173, 2017. | DOI : 10.1016/j.molp.2017.07.010

CAMUT L., DAVIÈRE J.M. and ACHARD P.

Dynamic regulation of DELLA protein activity: SPINDLY and SECRET AGENT unmasked!

Molecular Plant, 785-787, 2017. | DOI : 10.1016/j.molp.2017.05.003

PINON V., YAO X., DONG A. and SHEN W.H.

H3K4me3 is crucial for chromatin condensation and mitotic division during male gametogenesis

Plant Physiology, 174:1205-1215, 2017. | DOI : 10.1104/pp.17.00306

PITZALIS N. and HEINLEIN M.

The roles of membranes and associated cytoskeleton in plant virus replication and cell-to-cell movement

Journal of Experimental Botany, 69:117-132, 2017. | DOI : 10.1093/jxb/erx334

ROSELLI S., OLRY A., VAUTRIN S., CORITON O., RITCHIE D., GALATI G., NAVROT N., KRIEGER C., VIALART G., BERGÈS H., BOURGAUD F. and HEHN A.

A bacterial artificial chromosome (BAC) genomic approach reveals partial clustering of the furanocoumarin pathway genes in parsnip.

Plant Journal, 89(6):1119–1132, 2017. | DOI : 10.1111/tpj.13450

VINCENT T., VINGADASSALON A., UBRIG E., AZEREDO K., SROUR O., COGNAT V., GRAINDORGE S., SALINAS-GIEGÉ T., MARÉCHAL-DROUARD L. and DUCHÊNE A.M.

A genome-scale analysis of mRNAs targeting to plant mitochondria: upstream AUGs in 5’-UTRs reduce mitochondrial association

Plant Journal, 92(6):1132-1142, 2017. | DOI : 10.1111/tpj.13749

CÓRDOBA-CAÑERO D., COGNAT V., ARIZA R., ROLDÁN ARJONA T. and MOLINIER J.

Dual control of ROS1-mediated active DNA demethylation by the DNA DAMAGE BINDING protein 2 (DDB2)

Plant Journal, , 2017. | DOI : 10.1111/tpj.13753

HANHART P., THIESS M., AMARI K., BAJDZIENKO K., GIAVALISCO P., HEINLEIN M. and KEHR J.

Bioinformatic and proteomic analysis of the Brassica napus L. cyclophilins

Scientific Reports, 7(1):1514, 2017. | DOI : 10.1038/s41598-017-01596-5

FAL K., ASNACIOS A., CHABOUTÉ M.E. and HAMANT O.

Nuclear envelope: a new frontier in plant mechanosensing?

Biophysical reviews, 389-403., 2017. | DOI : 10.1007/s12551-017-0302-6.

FUCHS M., SANFAÇON H. and KEICHINGER C.

A renaissance in nepovirus research provides new insights into their molecular interface with hosts and vectors

Advances in Virus Research, 97:61-105, 2017.

SHCHEPETILNIKOV M. and RYABOVA L.

Auxin signaling in regulation of plant translation reinitiation

Frontiers in Plant Science, 14:1014, 2017. | DOI : 10.3389/fpls.2017.01014

MESTRE P., ARISTA G., PIRON M.C., RUSTENHOLZ C., RITZENTHALER C., MERDINOGLU D. and CHICH J.F.

Identification of a Vitis vinifera endo ß-1, 3 glucanase with antimicrobial activity against Plasmopara viticola

Molecular Plant Pathology, 18(5):708-719, 2017. | DOI : 10.1111/mpp.12431

MARTIN I.R., VIGNE E., BERTHOLD F., KOMAR V., LEMAIRE O., FUCHS M. and KEICHINGER C.

The 50 distal amino acids of the 2AHP homing protein of Grapevine fanleaf virus elicit a hypersensitive reaction on Nicotiana occidentalis

Molecular Plant Pathology, 731-743, 2017. | DOI : 10.1111/mpp.12558

PINKER F., SCHELCHER C., FERNANDEZ-MILLAN P., GOBERT A., BIRCK C., THUREAU A., ROBLIN P., GIEGÉ P. and SAUTER C.

Biophysical analysis of Arabidopsis protein-only RNase P alone and in complex with tRNA provides a refined model of tRNA binding.

Journal of Biological Chemistry, 292, 13904-13913., 2017.

MOLINIER J.

Genome and epigenome surveillance processes underlying UV exposure in plants

Genes, 8(11):1-12, 2017. | DOI : 10.3390/genes8110316

FARASIN J., KOECHLER S., VARET H., DESCHAMPS J., DILLIES M.A., PROUX C., ERHARDT M., HUBER A., JAGLA B., BRIANDET R., COPPÉE J.Y. and ARSÈNE-PLOETZE F.

Comparison of biofilm formation and motility processes in arsenic-resistant Thiomonas spp. strains revealed divergent response to arsenite.

Microbial Biotechnology, 10(4):789-803, 2017. | DOI : 10.1111/1751-7915.12556

BOISSINOT S., PICHON E., SORIN C., PICCINI C., SCHEIDECKER D., ZIEGLER-GRAFF V. and BRAULT V.

Systemic Propagation of a Fluorescent Infectious Clone of a Polerovirus Following Inoculation by Agrobacteria and Aphids

Viruses, 9(7):166-185, 2017. | DOI : 10.3390/v9070166

GELDREICH A., HAAS G., KUBINA J., BOUTON C., TANGUY M., ERHARDT M., KELLER M., RYABOVA L. and DIMITROVA M.

Formation of large viroplasms and virulence of Cauliflower mosaic virus in turnip plants depend on the N-terminal EKI sequence of viral protein TAV

PLoS ONE, 12(12):e0189062, 2017. | DOI : 10.1371/ journal.pone.0189062

GILMER D., RATTI C. and ICTV REPORT C.

ICTV Virus Taxonomy Profile: Benyviridae

Journal of General Virology, 98(7):1571-1572, 2017. | DOI : 10.1099/jgv.0.000864

LAZAREVA E., LEZZHOV A., GOLYSHEV S., MOROZOV S., HEINLEIN M. and SOLOVYEV A.

Similarities in intracellular transport of plant viral movement proteins BMB2 and TGB3

Journal of General Virology, 98:2379-2391, 2017. | DOI : 10.1099/jgv.0.000914

ADAMS M.J., ADKINS S., BRAGARD C., GILMER D., LI D., MACFARLANE S.A., WONG S.M., MELCHER U., RATTI C., RYU K.H. and ICTV REPORT C.

ICTV Virus Taxonomy Profile: Virgaviridae

Journal of General Virology, 98(8):1999-2000, 2017. | DOI : 10.1099/jgv.0.000884

HUANG Y., CHEN D.H., LIU B.Y., SHEN W.H. and RUAN Y.

Conservation and diversification of Polycomb Repressive Complex 2 (PRC2) proteins in the green lineage

Briefings in Functional Genomics, 16(2):106-119, 2017. | DOI : 10.1093/bfgp/elw007

MUNIER M., TRITSCH D., KREBS F., ESQUE J., HEMMERLIN A., ROHMER M., STOTE R.H. and GROSDEMANGE-BILLIARD C.

Synthesis and biological evaluation of phosphate isosters of fosmydomycin and analogs as inhibitors of Escherichia coli and Mycobacterium smegmatis 1-deoxyxylulose 5-phosphate reductoisomerases

Bioorganic & Medicinal Chemistry, 25(2):684-689, 2017. | DOI : 10.1016/j.bmc.2016.11.040

ALEXANDER M.M., MOHR J.P., DEBLASIO S.L., CHAVEZ J.D., ZIEGLER-GRAFF V., BRAULT V., BRUCE J.E. and (CILIA) HECK M.

Insights in luteovirid structural biology guided by chemical cross-linking and high resolution mass spectrometry

Virus Research, 241:42-52, 2017. | DOI : doi.org/10.1016/j.virusres.2017.05.005

BATZENSCHLAGER M., SCHMIT A.C., HERZOG E., FUCHS J., SCHUBERT V., HOULNÉ G. and CHABOUTÉ M.E.

MGO3 and GIP1 act synergistically for the maintenance of centromeric cohesion.

Nucleus, 8:98-105, 2017. | DOI : 10.1080/19491034.2016.1276142

SOFER L., GARCIA CABANILLAS D., GAYRAL M., TEPLIER R., POUZOULET J., DUCOUSSO M., DUFIN L., BREHELIN C., ZIEGLER-GRAFF V., BRAULT V. and REVERS F.

Identification of host factors potentially involved in RTM mediated resistance during potyvirus long distance movement

Archives of Virology, 1855-1865, 2017. | DOI : 10.1007/s00705-017-3292-6

BODAK M., CIRERA-SALINAS D., YU J., NGONDO P. and CIAUDO C.

Dicer, a new regulator of pluripotency exit and LINE-1 elements in mouse embryonic stem cells

FEBS Open Bio, 7(2):204-220, 2017. | DOI : 10.1002/2211-5463.12174

BELLOTT L., CHAIB A., PETITJEAN O., RIGO P. and GILMER D.

Apports et enseignements de la virologie en biologie contemporaine

Virologie, 21(5):199-210, 2017.

POTUSCHAK T. and GENSCHIK P.

Dark night, cold ground

Nature Plants, 3(11):846-847, 2017. | DOI : 10.1038/s41477-017-0043-3

INCARBONE M., ZIMMERMANN A., HAMMANN P., ERHARDT M., MICHEL F. and DUNOYER P.

Neutralization of mobile antiviral small RNA through peroxisomal import

Nature Plants, 3:17094, 2017. | DOI : 10.1038/nplants.2017.94

DAVIÈRE J.M. and ACHARD P.

Organ communication: Cytokinins on the move.

Nature Plants, 3:17116, 2017. | DOI : 10.1038/nplants.2017.116

XU S., BROCKMÖLLER T., NAVARRO QUEZADA A., KUHL H., GASE K., LING Z., ZHOU W., KREITZER C., STANKE M., TANG H., LYONS E., PANDEY P., PANDEY S.P., TIMMERMANN B., GAQUEREL E. and BALDWIN I.T.

Wild tobacco genomes reveal the evolution of nicotine biosynthesis

Proceedings of the National Academy of Sciences of the United States of America, 114(23):6133-6138, 2017. | DOI : 10.1073/pnas.1700073114

STITZ M. and GAQUEREL E.

Insect Resistance: An Emerging Molecular Framework Linking Plant Age and JA Signaling

Molecular Plant, 10:537-539, 2017. | DOI : 10.1016/j.molp.2017.02.006

LUU V.T., WEINHOLD A., ULLAH C., DRESSEL S., SCHOETTNER M., GASE K., GAQUEREL E. and BALDWIN I.T.

O-acyl sugars protect a wild tobacco from both native fungal pathogens and a specialist herbivore

Plant Physiology, 174:370-386, 2017. | DOI : 10.1104/pp.16.01904

NAAKE T. and GAQUEREL E.

MetCirc: navigating mass spectral similarity in high-resolution MS/MS metabolomics data

Bioinformatics, 2419-2420, 2017. | DOI : doi: 10.1093/bioinformatics/btx159

BROCKMÖLLER T., LING Z., LI D., GAQUEREL E., BALDWIN I.T. and XU S.

Nicotiana attenuata Data Hub (Na DH): an integrative platform for exploring genomic, transcriptomic and metabolomic data in wild tobacco

BMC Genomics, 18:79, 2017. | DOI : 10.1186/s12864-016-3465-9

CLAVEL M., MICHAELI S. and GENSCHIK P.

Autophagy: A Double-Edged Sword to Fight Plant Viruses.

Trends in Plant Science, 646-648, 2017. | DOI : 10.1016/j.tplants.2017.06.007

WANG S., WANG R., ZHAN Z., LIU T., KANG L., LV C., WERCK-REICHHART D., GUO L. and HUANG L.

Production of 3-geranyl-4-hydroxybenzoate acid in yeast, an important intermediate of shikonin biosynthesis pathway.

FEMS Yeast Research, 17(7):1-8, 2017. | DOI : 10.1093/femsyr/fox065.

MONTAVON T., KWON Y., ZIMMERMANN A., MICHEL F. and DUNOYER P.

New DRB complexes for new DRB functions in plants

RNA Biology, 14(12):1637-1641, 2017. | DOI : doi: 10.1080/15476286.2017.1343787

WANG J., BLEVINS T., PODICHETI R., HAAG J.R., TAN E.H., WANG F. and PIKAARD C.S.

Mutation of Arabidopsis SMC4 identifies condensin as a corepressor of pericentromeric transposons and conditionally expressed genes

Genes and Development, 31(15), 2017. | DOI : 10.1101/gad.301499.117

CHEN K. and OTTEN L.

Natural Agrobacterium Transformants: Recent Results and Some Theoretical Considerations

Frontiers in Plant Science, 13(8):1600, 2017. | DOI : 10.3389/fpls.2017.01600

PASTERNAK T., HASER T., FALK T., RONNEBERGER O., PALME K. and OTTEN L.

A 3D digital atlas of theNicotiana tabacumroot tip and itsuse to investigate changes in the root apical meristeminduced by theAgrobacterium 6b oncogene

Plant Journal, 92:31-42, 2017. | DOI : 10.1111/tpj.13631

OTTEN L.

How Agrobacterium, a Natural Genetic Engineer, Became a Tool for Modern Agriculture

Advances in Botanical Research, 86:17-44, 2017. | DOI : 10.1016/bs.abr.2017.11.002

KEICHINGER C., HEMMER C., BERTHOLD F. and RITZENTHALER C.

Molecular, Cellular, and Structural Biology of Grapevine fanleaf virus

In: Springer International Publishing AG (ed) Grapevine Viruses: Molecular Biology, Diagnostics and Management, chapter 23. Meng, Baozhong Martelli, Giovanni P. Golino, Deborah A. Fuchs, Marc., 2017.

ANDRET-LINK P., MARMONIER A., BELVAL L., HLEIBIEH K., RITZENTHALER C. and DEMANGEAT G.

Ectoparasitic Nematode Vectors of Grapevine Viruses

In: X (ed) Grapevine Viruses: Molecular Biology, Diagnostics and Management, chapter 25. Meng, B. Martelli, G.P. Fuchs, M. Golino, D.., 2017.

BLEVINS T.

Northern Blotting Techniques for Small RNAs

In: Igor Kovalchuk (ed) Plant Epigenetics: Methods and Protocols. Methods in Molecular Biology, vol 1456. Springer., 2017. | DOI : 10.1007/978-1-4899-7708-3_12

LIU Z., TAVARES R., FORSYTHE E.S., ANDRE F., LUGAN R., JONASSON G., BOUTET-MERCEY S., TOHGE T., BEILSTEIN M.A., WERCK D. and RENAULT H.

Evolutionary interplay between sister cytochrome P450 genes shapes plasticity in plant metabolism

Nature Communications, 7:13026, 2016. | DOI : 10.1038/ncomms13026

MICHAELI S., GALILI G., GENSCHIK P., FERNIE A. and AVIN-WITTENBERG T.

Autophagy in Plants--What's New on the Menu?

Trends in Plant Science, 134-44, 2016. | DOI : 10.1016

CHANDRASEKHARA C., MOHANNATH G., BLEVINS T., PONTVIANNE F. and PIKAARD C.S.

Chromosome-specific NOR inactivation explains selective rRNA gene silencing and dosage control in Arabidopsis

Genes and Development, 30(2):177-90, 2016. | DOI : 10.1101/gad.273755.115

LIAO P., HEMMERLIN A., BACH T.J. and CHYE M.L.

The potential of the mevalonate pathway for enhanced isoprenoid production.

Biotechnology Advances, 34(5):697-713, 2016. | DOI : 10.1016/j.biotechadv.2016.03.005

SCHEER H., ZUBER H., DE ALMEIDA C. and GAGLIARDI D.

Uridylation earmarks mRNAs for degradation... and more.

Trends in Genetics, 32(10):607-19, 2016. | DOI : 10.1016/j.tig.2016.08.003

TABET R., MOUTIN E., BECKER J.A.J., HEINTZ D., FOUILLEN L., FLATTER E., KREZEL W., ALUNNI V., KOEBEL P., DEMBÉLÉ D., TASSONE F., BARDONI B., MANDEL J.L., VITALE N., MULLER D., LE MERRER J. and MOINE H.

Fragile X mental retardation protein (FMRP) controls diacylglycerol kinase activity in neurons

Proceedings of the National Academy of Sciences of the United States of America, 113(26):3619-28, 2016. | DOI : 10.1073/pnas.1522631113

WILD M., DAVIÈRE J.M., REGNAULT T., SAKVARELIDZE-ACHARD L., CARRERA E., LOPEZ DIAZ I., CAYREL A., DUBEAUX G., VERT G. and ACHARD P.

Tissue-specific regulation of gibberellin signaling fine-tunes Arabidopsis iron deficiency responses.

Developmental Cell, 37(2):190-200, 2016. | DOI : 10.1016/j.devcel.2016.03.022

HAMMANI K., TAKENAKA M., MIRANDA R. and BARKAN A.

A PPR protein in the PLS subfamily stabilizes the 5'-end of processed rpl16 mRNAs in maize chloroplasts

Nucleic Acids Research, 44:4278-4288, 2016. | DOI : 10.1093/nar/gkw270

COGNAT V., MORELLE G., MEGEL C., LALANDE S., MOLINIER J., VINCENT T., SMALL I., DUCHÊNE A.M. and MARÉCHAL-DROUARD L.

The nuclear and organellar tRNA-derived RNA fragment population in Arabidopsis thaliana is hygly dynamic

Nucleic Acids Research, 45:3460-3472, 2016. | DOI : 10.1093/nar/gkw1122

SULTAN L.D., MILESHINA D., GREWE F., ROLLE K., ABUDRAHAM S., GLODOWICZ P., NIAZI A.K., KEREN I., SHEVTSOV S., KLIPCAN L., BARCISZEWSKI J., MOWER J.P., DIETRICH A. and OSTERSETZER-BIRAN O.

The reverse-transcriptase/RNA-maturase protein MatR is required for the splicing of various group II introns in Brassicaceae mitochondria

Plant Cell, 28:2805-2829, 2016. | DOI : 10.1105/tpc.16.00398

SCHALK C., DREVENSEK S., KRAMDI A., KASSAM M., AHMED I., COGNAT V., GRAINDORGE S., BERGDOLL M., BAUMBERGER N., HEINTZ D., BOWLER C., GENSCHIK P., BARNECHE F., COLOT V. and MOLINIER J.

DNA DAMAGE BINDING PROTEIN 2 (DDB2) Shapes the DNA Methylation Landscape

Plant Cell, 28:2043-2059, 2016. | DOI : 10.1105/tpc.16.00474

ZUBER H., SCHEER H., FERRIER E., SEMENT F.M., MERCIER P., STUPFLER B. and GAGLIARDI D.

Uridylation and PABP cooperate to repair mRNA deadenylated ends in Arabidopsis.

Cell Reports, 14(11):2707-17, 2016. | DOI : 10.1016/j.celrep.2016.02.060

ZVEREVA A., GOLYAEV V., TURCO S., GUBAEVA E., RAJESWARAN R., SHCHEPETILNIKOV M., SROUR O., RYABOVA L., BOLLER T. and POOGGIN M.

Viral protein suppresses oxidative burst and salicylic acid-dependent autophagy and facilitates bacterial growth on virus-infected plants.

New Phytologist, 211(3):1020-34, 2016. | DOI : 10.1111/nph.13967

LIU B., WEI G., SHI J., JIN J., SHEN T., NI T., SHEN W.H., YU Y. and DONG A.

SET DOMAIN GROUP 708, a histone H3 lysine 36-specific methyltransferase, controls flowering time in rice.

New Phytologist, 210(2):577-588, 2016. | DOI : 10.1111/nph.13768

NIEHL A., WYRSCH I., BOLLER T. and HEINLEIN M.

Double-stranded RNA induces a pattern-triggered immune signalling pathway in plants

New Phytologist, 211(3):1008-1019, 2016. | DOI : 10.1111/nph.13944

DAVIÈRE J.M. and ACHARD P.

A pivotal role of DELLAs in regulating multiple hormone signals

Molecular Plant, 9(1):10-20, 2016. | DOI : 10.1016/j.molp.2015.09.011

CHEN D., MOLITOR A., XU L. and SHEN W.H.

Arabidopsis PRC1 Core Component AtRING1 Regulates Stem Cell-determining Carpel Development mainly through Repression of Class-I KNOX Genes

BMC Biology, 14:112, 2016. | DOI : 10.1186/s12915-016-0336-4

LACOMBE B. and ACHARD P.

Long-distance transport of phytohormones through the plant vascular system

Current Opinion in Plant Biology, 34:1-8, 2016. | DOI : 10.1016/j.pbi.2016.06.007

WANG H., LIU C., CHENG J., LIU J., ZHANG L., HE C., SHEN W.H., JIN H., XU L. and ZHANG Y.

Arabidopsis flower and embryo developmental genes are repressed in seedlings by different combinations of Polcomb Group proteins in association with distinct sets of cis-regulatory elements.

PLoS Genetics, 12(1):e1005771, 2016. | DOI : 10.1371/journal.pgen.1005771

HÉMATY K., BELLEC Y., PODICHETI R., BOUTEILLER N., ANNE P., MORINEAU C., HASLAM R.P., BEAUDOIN F., NAPIER J.A., MOCKAITIS K., GAGLIARDI D., VAUCHERET H., LANGE H. and FAURE J.D.

The zinc-finger protein SOP1 is required for a subset of the nuclear exosome functions in Arabidopsis.

PLoS Genetics, 12(2):e1005817, 2016. | DOI : 10.1371/journal.pgen.1005817

FENG J., CHEN D., BERR A. and SHEN W.H.

ZRF1 chromatin regulators have Polycomb-silencing and independent roles in plant development

Plant Physiology, 172(3):1746-1759, 2016. | DOI : 10.1104/pp.16.00193

SIBOUT R., LE BRIS P., LEGEE F., CEZARD L., RENAULT H. and LAPIERRE C.

Structural redesigning Arabidopsis lignins into alkali-soluble lignins through the expression of p-coumaroyl-CoA:monolignol transferase PMT

Plant Physiology, 170(3):1358-1366, 2016. | DOI : 10.1104/pp.15.01877

MURCHA M., KUBISZEWSKI-JAKUBIAK S., TEIXEIRA P., GÜGEL I., KMIEC B., IVANOVA A., MEGEL C., SCHOCK A., KRAUS S., BERKOWITZ O., GLASER E., PHILIPPAR K., MARÉCHAL-DROUARD L., SOLL J. and WHELAN J.

Plant-specific preprotein and amino acid proteins are required for tRNA import into mitochondria

Plant Physiology, 172(4):2471-2490, 2016. | DOI : 10.1104/pp.16.01519

BELVAL L., HEMMER C., SAUTER C., REINBOLD C., FAUNY J.D., BERTHOLD F., ACKERER L., KEICHINGER C., LEMAIRE O., DEMANGEAT G. and RITZENTHALER C.

Display of whole proteins on inner and outer surfaces of Grapevine fanleaf virus-like particles.

Plant Biotechnology Journal, 14(12):2288-2299, 2016. | DOI : 10.1111/pbi.12582

BONNARD G., GOBERT A., PINKER F., ARRIVÉ M., SALINAS-GIEGÉ T. and GIEGÉ P.

Transfer RNA maturation in Chlamydomonas mitochondria, chloroplast and the nucleus by a single RNase P protein

Plant Journal, 87(3):270-280, 2016. | DOI : 10.1111/tpj.13198

ZHOU W., GAO J., MA J., CAO L., ZHANG C., ZHU Y., DONG A. and SHEN W.H.

Distinct roles of the histone chaperones NAP1 and NRP and the chromatin-remodeling factor INO80 in somatic homologous recombination in Arabidopsis thaliana

Plant Journal, 88:397-410, 2016. | DOI : 10.1111/tpj.13256

XIU Z., SUN F., SHEN Y., ZHANG X., JIANG R., BONNARD G., ZHANG J. and TAN B.C.

Empty pericarp16 is required for mitochondrial nad2 Intron 4 cis-splicing, complex I assembly and seed development in maize

Plant Journal, 85:507-19, 2016. | DOI : 10.1111/tpj.13122

FUJII S., SUZUKI T., GIEGÉ P., HIGASHIYAMA T., KOIZUKA N. and SHIKANAI T.

The Restorer-of-fertility-like 2 pentatricopeptide repeat protein and RNase P are required for the processing of mitochondrial orf291 RNA in Arabidopsis

Plant Journal, SOUS PRESSE, 2016. | DOI : 10.1111/tpj.13185

LIU B., BERR A., CHANG C., LIU C., SHEN W.H. and RUAN Y.

Interplay of the histone methyltransferases SDG8 and SDG26 in the regulation of transcription and plant flowering and development

Biochimica et Biophysica Acta Gene Regulatory Mechanisms, 1859:581-590, 2016. | DOI : 10.1016/j.bbagrm.2016.02.003

ROOS M., PRADERE H., NGONDO P., BEHERA A., ALLEGRINI S., CIVENNI G., ZAGALAK J.A., MARCHANT J.R., MENZI M., TOWBIN H., SCHEUERMANN J., NERI D., CAFLISCH A., CATAPANO C.V., CIAUDO C. and HALL J.

A Small-Molecule Inhibitor of Lin28

ACS Chemical Biology, 11(10):2773–2781, 2016. | DOI : 10.1021/acschembio.6b00232

NIEHL A., APPAIX F., BOSCA S., VAN DER SANDEN B., NICOUD J.F., BOLZE F. and HEINLEIN M.

Fluorescent Tobacco mosaic virus-derived bio-nanoparticles for intravital two-photon imaging

Frontiers in Plant Science, 6:1244, 2016. | DOI : 10.3389/fpls.2015.01244

DOBRENEL T., MANCERA-MARTÍNEZ E., FORZANI C., AZZOPARDI M., DAVANTURE M., MOREAU M., SHCHEPETILNIKOV M., LANGELLA O., ZIVY M., ROBAGLIA C., RYABOVA L., HANSON J. and MEYER C.

The Arabidopsis TOR Kinase Specifically Regulates the Expression of Nuclear Genes Coding for Plastidic Ribosomal Proteins and the Phosphorylation of the Cytosolic Ribosomal Protein S6.

Frontiers in Plant Science, 1611, 2016. | DOI : 10.3389/fpls.2016.01611

ILC T., WERCK D. and NAVROT N.

Meta-Analysis of the Core Aroma Components of Grape and Wine Aroma

Frontiers in Plant Science, tba, 2016. | DOI : 10.3389/fpls.2016.01472

ILC T., PARAGE C., BOACHON B., NAVROT N. and WERCK D.

Monoterpenol Oxidative Metabolism: Role in Plant Adaptation and Potential Applications

Frontiers in Plant Science, 7:tba, 2016. | DOI : 10.3389/fpls.2016.00509

CHABOUTÉ M.E. and BERR A.

GIP contributions to the regulation of centromere at the interface between the nuclear envelope and the nucleoplasm.

Frontiers in Plant Science, 7:118, 2016. | DOI : 10.3389/fpls.2016.00118

LAZAREVA E.A., LEZZHOV A.A., KOMAROVA T.V., MOROZOV S.Y., HEINLEIN M. and SOLOVYEV A.G.

A novel block of plant virus movement genes

Molecular Plant Pathology, 18(5):611-624, 2016. | DOI : 10.1111/mpp.12418

GUIU-ARAGONÉS C., SÁNCHEZ-PINA M.A., DÍAZ-PENDÓN J., PENA E.J., HEINLEIN M. and MARTÍN-HERNÁNDEZ A.M.

CMV1 is a gate for Cucumber mosaic virus transport from bundle sheath cells to phloem in melon

Molecular Plant Pathology, 17(6):973-984, 2016. | DOI : 10.1111/mpp.12351

LI Z., LI B., LIU J., GUO Z., LIU Y., LI Y., SHEN W.H., HUANG Y., HUANG H., ZHANG Y. and DONG A.

Transcription factors AS1 and AS2 interact with LHP1 to repress KNOX genes in Arabidopsis

Journal of Integrative Plant Biology, 58(12):959-970, 2016. | DOI : 10.1111/jipb.12485

CLAVEL M., PÉLISSIER T., MONTAVON T., TSCHOPP M.A., POUCH-PÉLISSIER M.N., DESCOMBIN J., JEAN V., DUNOYER P., BOUSQUET-ANTONELLI C. and DERAGON J.M.

Evolutionary history of double-stranded RNA binding proteins in plants: identification of new cofactors involved in easiRNA biogenesis

Plant Molecular Biology, 91(26858002):131-147, 2016.

LALLEMENT P.A., RORET T., TSAN P., GUALBERTO J.M., GIRARDET J.M., DIDIERJEAN C., ROUHIER N. and HECKER A.

Insights into ascorbate regeneration in plants: investigating the redox and structural properties of dehydroascorbate reductases from Populus trichocarpa

Biochemical Journal, 473(6):717-731, 2016. | DOI : 10.1042/BJ20151147

CARDI M., ZAFFAGNINI M., DE LILLO A., CASTIGLIA D., CHIBANI K., GUALBERTO J.M., ROUHIER N., JACQUOT J.P. and ESPOSITO S.

Plastidic P2 glucose-6P dehydrogenase from poplar is modulated by thioredoxin m-type: Distinct roles of cysteine residues in redox regulation and NADPH inhibition

Plant Science, 252:257-266, 2016. | DOI : 10.1016/j.plantsci.2016.08.003

CHEN K. and OTTEN L.

Morphological analysis of the 6b oncogene-induced enation syndrome

Planta, 243:131-148, 2016. | DOI : 10.1007/s00425-015-2387-0

CHEN D., HUANG Y., RUAN Y. and SHEN W.H.

The evolutionary landscape of PRC1 core components in green lineage

Planta, 243(4):825-46, 2016. | DOI : 10.1007/s00425-015-2451-9

FLOBINUS A., HLEIBIEH K., KLEIN E., RATTI C., BOUZOUBAA S.E. and GILMER D.

A Viral Noncoding RNA Complements a Weakened Viral RNA Silencing Suppressor and Promotes Efficient Systemic Host Infection

Viruses, 8:12, 2016. | DOI : 10.3390/v8100272

DALL'ARA M., RATTI C., BOUZOUBAA S.E. and GILMER D.

Ins and Outs of Multipartite Positive-Strand RNA Plant Viruses: Packaging versus Systemic Spread

Viruses, 8(228):1-18, 2016. | DOI : 10.3390/v8080228

HUCHELMANN A., BRAHIM M.S., GERBER E., TRITSCH D., BACH T.J. and HEMMERLIN A.

Farnesol-mediated shift in the metabolic origin of prenyl groups used for protein prenylation in plants.

Biochimie, 127:95-102, 2016. | DOI : 10.1016/j.biochi.2016.04.021

ALAMGEER P., CHABERT P., AKHTAR M.S., JABEEN Q., DELECOLLE J., HEINTZ D., GARO E., HAMBURGER M., AUGER C., LUGNIER C., KIM H.J., OAK M.H. and SCHINI-KERTH V.B.

Endothelium-independent vasorelaxant effect of a Berberis orthobotrys root extract via inhibition of phosphodiesterases in the poricine coronary artery

Phytomedicine, 23:793-799, 2016. | DOI : 10.1016/j.phymed.2016.04.005

FERNANDEZ-MILLAN P., SCHELCHER C., CHIHADE J., MASQUIDA B., GIEGÉ P. and SAUTER C.

Transfer RNA: From pioneering crystallographic studies to contemporary tRNA biology

Archives of Biochemistry and Biophysics, 602:95-105, 2016. | DOI : 10.1016/j.abb.2016.03.005

HUANG Y., CHEN D., LIU C., SHEN W.H. and RUAN Y.

Evolution and conservation of JmjC domain proteins in the green lineage

Molecular Genetics and Genomics, 291:33-49, 2016. | DOI : 10.1007/s00438-015-1089-4

PENA E.J. and HEINLEIN M.

In vivo RNA visualization in plants using MS2 tagging

Methods in Enzymology, 572:105-22, 2016. | DOI : 10.1016/bs.mie.2016.02.004

HEUDE C., ELBAYED K., JEZEQUEL T., FANUEL M., LUGAN R., HEINTZ D., BENOIT P. and PIOTTO M.

Metabolic characterization of caviar specimens by 1H NMR spectroscopy : Towards caviar authenticity and integrity

Food Analytical Methods, SOUS PRESSE, 2016. | DOI : 10.1021/jf071294b

KONSTANTINOV Y.M., DIETRICH A., WEBER-LOTFI F., IBRAHIM N., KLIMENKO E.S., TARASENKO V.I. and KOULINTCHENKO M.V.

DNA Import into Mitochondria

Biochemistry (Moscow), 81:1044-1056, 2016. | DOI : 10.1134/S0006297916100035

SCHALK C. and MOLINIER J.

Global Genome Repair factors control DNA methylation patterns in Arabidopsis

Plant Signaling and Behavior, , 2016. | DOI : 10.1080/15592324.2016.1253648

AGIN A., HEINTZ D., RUHLAND E., CHAO DE LA BARCA J.M., ZUMSTEG J., MOLA V., GAUCHEZ A.S. and NAMER I.J.

Metabolomics - an overview. From basic principles to potential biomarkers (part 1)

Medecine Nucleaire, 40:4-10, 2016.

SONAWANE P., POLLIER J., PANDA S., SZYMANSKI J., MASSALHA H., YONA M., UNGER T., MALITSKY S., ARENDT P., PAUWELS L., ALMEKIAS-SIEGL E., ROGACHEV I., MEIR S., CÁRDENAS P., MASRI A., PETRIKOV M., SCHALLER H., SCHAFFER A., KAMBLE A., GIRI A., GOOSSENS A. and AHARONI A.

Plant cholesterol biosynthetic pathway overlaps with phytosterol metabolism

Nature Plants, 16205-16217, 2016. | DOI : 10.1038/nplants.2016.205

SCHELCHER C., SAUTER C. and GIEGÉ P.

Mechanistic and structural studies of protein-only RNase P compared to ribonucleoproteins reveal the two faces of a same enzymatic activity.

Biomolecules, 6, E30, 2016.

HEITZ T., SMIRNOVA E., WIDEMANN E., AUBERT Y., PINOT F. and MENARD R.

The rise and fall of Jasmonate Biological activities

Sub-cellular biochemistry, 86:405-26, 2016. | DOI : 10.1007/978-3-319-25979-6_16

BERR A., ZHANG X. and SHEN W.H.

Réciprocité entre transcription active et méthylation des histones

Biologie Aujourd’hui, 210(4):269-282, 2016. | DOI : 10.1051/jbio/2017004

LI D., HEILING S., BALDWIN I.T. and GAQUEREL E.

Illuminating a plant’s tissue-specific metabolic diversity using computational metabolomics and information theory

Proceedings of the National Academy of Sciences of the United States of America, 113(47):E7610-E7618, 2016. | DOI : 10.1073/pnas.1610218113

HEILING S., KHANAL S., BARSCH A., ZUREK G., BALDWIN I.T. and GAQUEREL E.

Using the knowns to discover the unknowns: MS‐based dereplication uncovers structural diversity in 17‐hydroxygeranyllinalool diterpene glycoside production in the Solanaceae

Plant Journal, 85:561-577, 2016. | DOI : 10.1111/tpj.13119

LI D., BALDWIN I.T. and GAQUEREL E.

Beyond the canon: within-plant and population-level heterogeneity in jasmonate signaling engaged by plant-insect interactions

Plants, 5(1):14, 2016. | DOI : 10.3390/plants5010014

WIDEMANN E., SMIRNOVA E., AUBERT Y., MIESCH L. and HEITZ T.

Dynamics of Jasmonate metabolism upon flowering and accross leaf stress responses in Arabidopsis thaliana

Plants, 5(1):doi : 10.3390/plants5010004, 2016. | DOI : 10.3390/plants5010004

LAURSEN T., BORCH J., KNUDSEN C., BAVISHI K., TORTA F., MARTENS H.J., SILVESTRO D., HATZAKIS N., WENK M.R., DAFFORN T.R., OLSEN C.E., MOTAWIA M.S., HAMBERGER B., MØLLER B.L. and BASSARD J.E.

Characterization of a dynamic metabolon producing the defense compound dhurrin in sorghum

Science, 354:890-893, 2016. | DOI : 10.1126/science.aag2347

CHEN K., DE BORNE F., JULIO E., OBSZYNSKI J., PALE P. and OTTEN L.

Root-specific expression of opine genes and opine accumulation in some cultivars of the naturally occurring genetically modified organism Nicotiana tabacum

Plant Journal, 87(3):258-69, 2016. | DOI : 10.1111/tpj.13196

BEY T., JAMGE S., KLEMME S., KOMAR D.N., LE GALL S., MIKULSKI P., SCHMIDT M., ZICOLA J. and BERR A.

Chromatin and epigenetics in all their states: Meeting report of the first conference on Epigenetic and Chromatin Regulation of Plant Traits - January 14 - 15, 2016 - Strasbourg, France.

Epigenetics, 625, 2016. | DOI : 10.1080/15592294.2016.1185580

CHABOUTÉ M.E. and SCHMIT A.C.

Unique characteristics of Cell Division in Vascular Plants

In: Schmit AC (ed) eLS, chapter 1. John Wiley & Sons., 2016. | DOI : 10.1002/9780470015902.a0001686.pub3

HEINLEIN M.

Viral transport and interaction with the host cytoskeleton

In: Klenow, Tatjana (eds) Plant-Virus Interactions: Molecular Biology, Intra-and Intercellular Transport, chapter 2. Springer., 2016.

BOBADILLA R. and BERR A.

Histone Methylation - A Cornerstone for Plant Responses to Environmental Stresses?

In: ?? (ed) Abiotic and Biotic Stress in Plants - Recent Advances and Future Perspectives, chapter 2. ??., 2016. | DOI : 10.5772/61733

GILMER D.

Molecular Biology and Replication of Beet Necrotic Yellow Vein Virus

In: Biancardi, Enrico Tamada, Tetsuo (eds) Rhizomania, Springer., 2016. | DOI : 10.1007/978-3-319-30678-0_4

KING B.C., VAVITSAS K., KHAIRUL IKRAM N.K.B., SCHRØDER J., SCHARFF L.B., BASSARD J.E., HAMBERGER B., JENSEN P.E. and SIMONSEN H.T.

In Vivo Assembly of DNA-fragments in the Moss, Physcomitrella Patens

Scientific Reports, 6:25030, 2016. | DOI : 10.1038/srep25030

SANTORI F.R., HUANG P., VAN DE PAVERT S.A., DOUGLASS E.F.J., LEAVER D.J., HAUBRICH B.A., KEBER R., LORBEK G., KONIJN T., ROSALES B.N., ROZMAN D., HORVAT S., RAHIER A., MEBIUS R.E., RASTINEJAD F., NES W.D. and LITTMAN D.R.

Identification of Natural RORy ligands that Regulate the Development of Lymphoid Cells.

Cell Metabolism, 21(2):286-97, 2015. | DOI : 10.1016/j.cmet.2015.01.004

LECHNER M., ROSSMANITH W., HARTMANN R., THOLKEN C., GUTMANN B., GIEGÉ P. and GOBERT A.

Distribution of Ribonucleoprotein and Protein-only RNase P in Eukarya.

Molecular Biology and Evolution, 32, 3186-3193, 2015.

LEE J., YUN J.Y., ZHAO W., SHEN W.H. and AMASINO R.M.

A methyltransferase required for proper timing of the vernalization response in Arabidopsis

Proceedings of the National Academy of Sciences of the United States of America, 112(7):2269-2274, 2015. | DOI : 10.1073/pnas.1423585112

BATZENSCHLAGER M., LERMONTOVA I., SCHUBERT V., FUCHS J., BERR A., KOINI M.A., HOULNÉ G., HERZOG E., RUTTEN T., ALIOUA A., FRANSZ P., SCHMIT A.C. and CHABOUTÉ M.E.

Arabidopsis MZT1 homologs GIP1 and GIP2 are essential for centromere architecture

Proceedings of the National Academy of Sciences of the United States of America, 112(28):8656-8660, 2015. | DOI : 10.1073/pnas.1506351112

BRANSCHEID A., MARCHAIS A., SCHOTT G., LANGE H., GAGLIARDI D., ANDERSEN S.U., VOINNET O. and BRODERSEN P.

SKI2 mediates degradation of RISC 5'-cleavage fragments and prevents secondary siRNA production from miRNA targets in Arabidopsis.

Nucleic Acids Research, 43(22):10975-10988, 2015. | DOI : 10.1093/nar/gkv1014

GUALBERTO J.M., LE RET M., BEATOR B. and KÜHN K.

The RAD52-like protein ODB1 is required for the efficient excision of two mitochondrial introns spliced via first-step hydrolysis.

Nucleic Acids Research, 43(13):6500-6510, 2015. | DOI : 10.1093/nar/gkv540

NIETO C., LOPEZ-SALMERON V., DAVIÈRE J.M. and PRAT S.

ELF3-PIF4 Interaction Regulates Plant Growth Independently of the Evening Complex

Current Biology, 25(2):187-93, 2015. | DOI : 10.1016/j.cub.2014.10.070

POTUSCHAK T. and BACHMAIR A.

Seedling Germination: Seedlings Follow Sunshine and Fresh Air

Current Biology, R565-6, 2015. | DOI : 10.1016/j.cub.2015.05.001

BOACHON B., JUNKER R.R., MIESCH L., BASSARD J.E., HÖFER R., CAILLIEAUDEAUX R., SEIDEL D.E., LESOT A., HEINRICH C., GINGLINGER J.F., ALLOUCHE L., VINCENT B., WAHYUNI D.S.C., PAETZ C., BERAN F., MIESCH M., SCHNEIDER B., LEISS K. and WERCK D.

CYP76C1 (Cytochrome P450)-mediated linalool metabolism and the formation of volatile and soluble linalool oxides in Arabidopsis flowers: a strategy for defense against floral antagonists

Plant Cell, 27:2972-2990, 2015. | DOI : 10.1105/tpc.15.00399

WALLET C., LE RET M., BERGDOLL M., BICHARA M., DIETRICH A. and GUALBERTO J.M.

The RECG1 DNA translocase is a key factor in recombination surveillance, repair, and segregation of the mitochondrial DNA in Arabidopsis

Plant Cell, 27:2907-2925, 2015. | DOI : 10.1105/tpc.15.00680

NOIR S., MARROCCO K., HLEIBIEH K., THOMANN A., GUSTI A., BITRIAN M., SCHNITTGER A. and GENSCHIK P.

The Control of Arabidopsis thaliana Growth by Cell Proliferation and Endoreplication Requires the F-Box Protein FBL17.

Plant Cell, 27:1461-1476, 2015. | DOI : 10.1105/tpc.114.135301

KUMAR N., HARASHIMA H., KALVE S., BRAMSIEPE J., WANG K., SIZANI B.L., BERTRAND L.L., JOHNSON M.C., FAULK C., DALE R., SIMMONS L.A., CHURCHMAN M.L., SUGIMOTO K., KATO N., DASANAYAKE M., BEEMSTER G., SCHNITTGER A. and LARKIN J.C.

Functional conservation in the SIAMESE-RELATED family of cyclin-dependent kinase inhibitors in land plants

Plant Cell, 27:3065-3080, 2015. | DOI : 10.1105/tpc.15.00489

BLEVINS T., PODICHETI R., MISHRA V., MARASCO M., WANG J., RUSCH D., TANG H. and PIKAARD C.S.

Identification of Pol IV and RDR2-dependent precursors of 24 nt siRNAs guiding de novo DNA methylation in Arabidospis

eLife, 4:e09591, 2015. | DOI : 10.7554/eLife.09591

SMIRNOVA E., FIRTH A.E., MILLER W.A., SCHEIDECKER D., BRAULT V., REINBOLD C., RAKOTONDRAFARA A.M., CHUNG B.Y.W. and ZIEGLER-GRAFF V.

Discovery of a small Non-AUG-Initiated ORF in Poleroviruses and Luteoviruses that is required for long-distance movement

PLoS pathogens, 6(11):e1004868, 2015. | DOI : 10.1371/journal.ppat.1004868

LIU Z., BOACHON B., LUGAN R., TAVARES R., ERHARDT M., MUTTERER J., DEMAIS V., PATEYRON S., BRUNAUD V., OHNISHI T., PENCIK A., ACHARD P., GONG F., HEDDEN P., WERCK D. and RENAULT H.

A conserved cytochrome P450 evolved in seed plants regulates flower maturation

Molecular Plant, 8:1751-1765, 2015. | DOI : 10.1016/j.molp.2015.09.002

SCHNEE G., NIETO FAZA O., SPECKLIN D., JACQUES B., KARMAZIN L., WELTER R., SILVA LOPEZ C. and DAGORNE S.

Normal-To-Abnormal NHC Rearrangement of Al, Ga and In trialkyl Complexes: Scope, Mechanism, Reactivity Studies and H2 activation

Chemistry - A European Journal, 21:17959-17972, 2015. | DOI : 10.1002/chem.201503000

AUBERT Y., WIDEMANN E., MIESCH L., PINOT F. and HEITZ T.

CYP94-mediated jasmonoyl-isoleucine hormone oxidation shapes jasmonate profiles and attenuates defence responses to Botrytis cinerea infection

Journal of Experimental Botany, 66(13):3879-3892, 2015. | DOI : 10.1093/jxb/erv190

ZHOU W., ZHU Y., DONG A. and SHEN W.H.

Histone H2A/H2B chaperones: from molecules to chromatin-based functions in plant growth and development.

Plant Journal, 83:78-95, 2015. | DOI : 10.1111/tpj.12830

BERR A., SHAFIQ S., PINON V., DONG A. and SHEN W.H.

The trxG family histone-methyltransferase SET DOMAIN GROUP 26 promotes flowering via a distinctive genetic pathway.

Plant Journal, 81:316-328, 2015. | DOI : 10.1111/tpj.12729

LERMONTOVA I., SANDMANN M., MASCHER M., SCHMIT A.C. and CHABOUTÉ M.E.

Centromeric chromatin and its dynamics in plants

Plant Journal, 83:4-17, 2015. | DOI : 10.1111/tpj.12875

NAKAMOTO M., SCHMIT A.C., HEINTZ D., SCHALLER H. and OHTA D.

Diversification of sterol methyltransferase enzymes in plants and a role for ( beta )-sitosterol in oriented cell plate formation and polarized growth

Plant Journal, 84(5):860-874, 2015. | DOI : 10.1111/tpj.13043

SIKORSKI P.J., ZUBER H., PHILIPPE L., SEMENT F.M., CANADAY J., KUFEL J., GAGLIARDI D. and LANGE H.

Distinct 18S rRNA precursors are targets of the exosome complex, the exoribonuclease RRP6L2 and the terminal nucleotidyltransferase TRL in Arabidopsis thaliana.

Plant Journal, 83(6):991-1004, 2015. | DOI : 10.1111/tpj.12943

SUN F., WANG X., BONNARD G., SHEN Y., XIU Z., LI X., GAO D., ZHANG Z. and TAN B.C.

Empty pericarp7 encodes a mitochondrial E-subgroup pentatricopeptide repeat protein that is required for ccmF editing, mitochondrial function and seed development in maize.

Plant Journal, 84(2):283-95, 2015. | DOI : 10.1111/tpj.12993

ZHANG C., CAO L., RONG L., AN Z., ZHOU W., MA J., SHEN W.H., ZHU Y. and DONG A.

The chromatin-remodeling factor AtINO80 plays crucial roles in genome stability maintenance and in plant development.

Plant Journal, 82:655-668, 2015. | DOI : 10.1111/tpj.12840

MOSHE A., BELAUSOV E., NIEHL A., HEINLEIN M., CZOSNEK H. and GOROVITS R.

The Tomato yellow leaf curl virus V2 protein forms aggregates depending on the cytoskeleton integrity and binds viral genomic DNA.

Scientific Reports, 5(5):09967, 2015. | DOI : 10.1038/srep09967

LOTFI F., KOULINTCHENKO M.V., IBRAHIM N., HAMMANN P., MILESHINA D.V., KONSTANTINOV Y.M. and DIETRICH A.

Nucleic acid import into mitochondria: New insights into the translocation pathways

Biochimica et Biophysica Acta - Molecular Cell Research, 1853:3165-3181, 2015. | DOI : 10.1016/j.bbamcr.2015.09.011

BUSCHMANN H., DOLS J., KOPISCHKE S., PENA E.J., ANDRADE-NAVARRO M.A., ZACHGO S., SZYMANSKI D.B., HEINLEIN M., DOONAN J.H. and LLOYD C.W.

Arabidopsis KCBP interacts with AIR9 but stays in the cortical division zone throughout mitosis via its MyTH4-FERM domain.

Journal of Cell Science, 128(11):2033-46, 2015. | DOI : 10.1242/jcs.156570

SPENLÉ C., GASSER I., SAUPE F., JANSSEN K.P., ARNOLD C., KLEIN A., VAN DER HEYDEN M., MUTTERER J., NEUVILLE-MÉCHINE A. and CHENARD M.P.

Spatial organization of the tenascin-C microenvironment in experimental and human cancer

Cell Adhesion & Migration, 9(1-2):4-13, 2015. | DOI : 10.1080/19336918.2015.1005452

SHI J., DONG A. and SHEN W.H.

Epigenetic regulation of rice flowering and reproduction

Frontiers in Plant Science, 5(janv 28):803, 2015. | DOI : 10.3389/fpls.2014.00803

FARASIN J., ANDRES J., CASIOT C., BARBE V., FAERBER J., HALTER D., HEINTZ D., KOECHLER S., LIÈVREMONT D., LUGAN R., MARCHAL M., PLEWNIAK F., SEBY F., BERTIN P.N. and ARSÈNE-PLOETZE F.

Thiomonas sp. CB2 is able to degrade urea and promote toxic metal precipitation in acid mine drainage waters supplemented with urea.

Frontiers in Microbiology, 6:993, 2015. | DOI : 10.3389/fmicb.2015.00993

SCHMIT A.C., HERZOG E. and CHABOUTÉ M.E.

GIP/MZT1 proteins : key players in centromere regulation

Cell Cycle, 14(23):3665-3666, 2015. | DOI : 10.1080/15384101.2015.1112614

WIDEMANN E., HEITZ T., MIESCH L., MIESCH M., PINOT F. and LUGAN R.

Identification of the 12-oxojasmonoyl-isoleucine, a new jasmonate in Arabidopsis, by combining chemical derivatization and LC-MS/MS analysis

Metabolomics, 11306-014, 2015.

LALLEMENT P.A., MEUX E., GUALBERTO J.M., DUMARCAY S., FAVIER F., DIDIERJEAN C., SAUL F., HAOUZ A., MOREL-ROUHIER M., GELHAYE E., ROUHIER N. and HECKER A.

Glutathionyl-hydroquinone reductases from poplar are plastidial proteins which deglutathionylate glutathione-conjugated reduced and oxidized quinones.

FEBS Letters, 589(1):37-44, 2015. | DOI : 10.1016/j.febslet.2014.11.021

SALINAS-GIEGÉ T., GIEGÉ R. and GIEGÉ P.

tRNA biology in mitochondria

International Journal of Molecular Sciences, 16(3):4518-4559, 2015. | DOI : 10.3390/ijms16034518

MEGEL C., MORELLE G., LALANDE S., DUCHÊNE A.M., SMALL I. and MARÉCHAL-DROUARD L.

Surveillance and cleavage of eukaryotic tRNAs.

International Journal of Molecular Sciences, 16:1873-1893, 2015. | DOI : 10.3390/ijms16011873

BOUTON C., GELDREICH A., RAMEL L., RYABOVA L., DIMITROVA M. and KELLER M.

Cauliflower mosaic virus transcriptome reveals a complex alternative splicing pattern

PLoS ONE, 10(7):e0132665, 2015. | DOI : 10.1371/journal.pone.0132665

HEINLEIN M.

Plant virus replication and movement

Virology, 479-480:657-671, 2015. | DOI : 10.1016/j.virol.2015.01.025

RODRIGUEZ-MEDINA C., BOISSINOT S., CHAPUIS S., GEREIGE D., RASTEGAR M., ERDINGER M., REVERS F., ZIEGLER-GRAFF V. and BRAULT V.

A protein kinase binds the C-terminal domain of the readthrough protein of Turnip yellows virus and regulates virus accumulation

Virology, 486:44-53, 2015. | DOI : 10.1016/j.virol.2015.08.031

HEINRICH C., WIDEMANN E., SANZ J., LUGAN R., HEITZ T., PINOT F., MIESCH M. and MIESCH L.

A route for the total synthesis of enantiomerically enriched jasmonates 12-COOH-JA and 12-COOH-JA-Ile.

European Journal of Organic Chemistry, 1130-1136, 2015. | DOI : 10.1104/pp.110.168617

DIETRICH A., WALLET C., IQBAL R.K., GUALBERTO J.M. and LOTFI F.

Organellar non-coding RNAs : Emerging regulation mechanisms

Biochimie, 117:48-62, 2015. | DOI : 10.1016/j.biochi.2015.06.027

WIDEMANN E., GRAUSEM B., RENAULT H., PINEAU E., HEINRICH C., LUGAN R., ULLMANN P., MIESCH L., AUBERT Y., MIESCH M., HEITZ T. and PINOT F.

Sequential oxidation of Jasmonoyl-Phenylalanine and Jasmonoyl-Isoleucine by multiple cytochrome P450 of the CYP94 family through newly identified aldehyde intermediates

Phytochemistry, 117:388-399, 2015. | DOI : 10.1016/j.phytochem.2015.06.027

PAKDEL A., MOUNIER C., KLEIN E., HLEIBIEH K., MONSION B., MUTTERER J., ERHARDT M., BOUZOUBAA S.E., RATTI C. and GILMER D.

On the interaction and localization of the beet necrotic yellow vein virus replicase

Virus Research, 196:94-104, 2015. | DOI : 10.1016/j.virusres.2014.11.001

ALMASI R., MILLER W.A. and ZIEGLER-GRAFF V.

Mild and severe cereal yellow dwarf viruses differ in silencing suppressor efficiency of the P0 protein

Virus Research, 208:199-206, 2015. | DOI : 10.1016/j.virusres.2015.06.020

SCOTTI N., SANNINO L., HAMMAN P., DE STRADIS A., GIORIO P., MARÉCHAL-DROUARD L., BOCK R. and CARDI T.

The HIV-1 Pr55gag polyprotein binds to plastidial membranes and leads to severe impairment of chloroplast biogenesis and seedling lethality in transplastomic tobacco plants.

Transgenic Research, 24:319-331, 2015. | DOI : 10.1007/s11248-014-9845-5

KOZLOWSKA-MAKULSKA A., HASIOW-JAROSZEWSKA B., SZYNDEL M.S., HERRBACH E., BOUZOUBAA S.E., LEMAIRE O. and BEUVE M.

Phylogenetic relationships and the occurrence of interspecific recombination between beet chlorosis virus (BChV) and Beet mild yellowing virus (BMYV)

Archives of Virology, 160:429-433, 2015. | DOI : 10.1007/s00705-014-2245-6

SPECKLIN D., MAMERI S., LOUKOPOULOS E., KOSTAKIS G.E. and WELTER R.

A synthetic and crystal structure study of a collection of coordination polymers based on alkaline aroylhydrazonates

Polyhedron, 100:359-372, 2015.

BENDER R., WELTER R. and BRAUNSTEIN P.

Phosphanido-bridged triangular platinum clusters as versatile platforms: A personal account

Inorganica Chimica Acta, 424:20-28, 2015.

LEHLEH A., BEGHIDJA A., BEGHIDJA C., WELTER R. and KURMOO M.

Synthesis, structures and magnetic properties of dimeric Copper and trimeric Cobalt complexes supported by bridging cinnamate and chelating phenanthroline.

Inorganica Chimica Acta, 18(5):530-539, 2015.

VILLETTE C., BERNA A., COMPAGNON V. and SCHALLER H.

Plant sterol diversity in pollen from Angiosperms

Lipids, 50(8):749-760, 2015. | DOI : 10.1007/s11745-015-4008-x

GAS-PASCUAL E., SIMONOVIK B., SCHALLER H. and BACH T.J.

Inhibition of cycloartenol synthase (CAS) function in tobacco BY-2 cells.

Lipids, 5(8):761-772, 2015. | DOI : 10.1007/s11745-015-4036-6

GAS-PASCUAL E., SIMONOVIK B., HEINTZ D., BERGDOLL M., SCHALLER H. and BACH T.J.

Inhibition of cycloartenol synthase (CAS) function in tobacco BY-2 cell suspensions - A proteomic analysis

Lipids, 50(8):773-784, 2015. | DOI : 10.1007/s11745-015-4041-9

MAMERI S., SPECKLIN D. and WELTER R.

Dinuclear Manganese, Iron, Chromium, and Cobalt Complexes Derived from Aroylhydrazone Ligands: Synthetic Strategies, Crystal Structures, and Magnetic Properties.

Comptes Rendus Chimie, 18(12):1370-1384, 2015.

HANANO A., BESSOULE J.J., HEITZ T. and BLÉE E.

Involvement of the caleosin/peroxygenase RD20 in the control of cell death during Arabidopsis responses to pathogens

Plant Signaling and Behavior, 10(3):e991574, 2015. | DOI : 10.4161/15592324.2014.991574

PINKER F., GIEGÉ P. and SAUTER C.

Crystallization and crystallographic analysis of an Arabidopsis nuclear proteinaceaous RNase P.

Acta crystallographica. Section F, Structural biology communications, 71, 1372-1377, 2015.

BOUTON C., GELDREICH A., RYABOVA L., KELLER M. and DIMITROVA M.

Le virus de la mosaïque du chou-fleur (CaMV), encore et toujours.

Virologie, 19(3):119-139, 2015.

HIMBER C. and DUNOYER P.

The Tracking of Intercellular Small RNA Movement

Methods in Molecular Biology, 1217:275-281, 2015. | DOI : 10.1007/978-1-4939-1523-1_18

ZHAO W., SHAFIQ S., BERR A. and SHEN W.H.

Genome-wide gene expression profiling to investigate molecular phenotypes of Arabidopsis mutants deprived in distinct histone methyltransferases and demethylases

Genomics Data, 4:143-145, 2015. | DOI : 10.1016/j.gdata.2015.04.006

PENA E.J., HEINLEIN M. and SAMBADE A.

In vivo RNA labelling using MS2

Methods in Molecular Biology, 1217:329-341, 2015. | DOI : 10.1007/978-1-4939-1523-1_21

HEINLEIN M.

Plasmodesmata : channels for viruses on the move

Methods in Molecular Biology, 1217:25-52, 2015. | DOI : 10.1007/978-1-4939-1523-1_2

DI DONATO M. and AMARI K.

Analysis of the role of myosins in targeting proteins to plasmodesmata

Methods in Molecular Biology, 1217:283-293, 2015. | DOI : 10.1007/978-1-4939-1523-1_19

REGNAULT T., DAVIÈRE J.M., WILD M., SAKVARELIDZE-ACHARD L., HEINTZ D., CARRERA BERGUA E., LOPEZ DIAZ I., GONG F., HEDDEN P. and ACHARD P.

The gibberellin precursor GA12 acts as a long-distance growth signal in Arabidopsis

Nature Plants, 1(6):15073, 2015. | DOI : 10.1038/nplants.2015.73

HARTMANN M., HEMMERLIN A., ROHMER M. and BACH T.J.

Development of an image-based screening system for inhibitors of the plastidial MEP pathway and of protein geranylgeranylation

F1000Research, 4:14, 2015.

LI D., BALDWIN I.T. and GAQUEREL E.

Navigating natural variation in herbivory-induced secondary metabolism in coyote tobacco populations using MS/MS structural analysis

Proceedings of the National Academy of Sciences of the United States of America, 112(30):E4147-55, 2015. | DOI : 10.1073/pnas.1503106112

HEINLEIN M.

Plasmodesmata - Methods and Protocols

Springer Protocols - Methods in Molecular Biology, Springer - Humana Press, New York, 346, 2015.

MILESHINA D., NIAZI A.K., WYSZKO E., SZYMANSKI M., VAL R., VALENTIN C., BARCISZEWSKI J. and DIETRICH A.

Mitochondrial targeting of catalytic RNAs

In: Weissig V., Edeas M. (eds) Mitochondrial Medicine: Volume II, Manipulating Mitochondrial Function. Methods Mol. Biol., vol 1265. Springer Science & Business Media, New York., 2015.

MILESHINA D., NIAZI A.K., WEBER-LOTFI F., GUALBERTO J.M. and DIETRICH A.

Mitochondrial Genetic Manipulation

In: Li X.Q., Donnelly D., Jensen T.G. (eds) Somatic Genome Manipulation: Advances, Methods and Applications, chapter 13. Springer-Verlag, Berlin, Heidelberg, Germany., 2015.

BLEVINS T., PONTVIANNE F., COCKLIN R., PODICHETI R., CHANDRASEKHARA C., YERNENI S., BRAUN C., LEE B., RUSCH D., MOCKAITIS K., TANG H. and PIKAARD C.S.

A two-step process for epigenetic inheritance in Arabidopsis.

Molecular Cell, 54(1):30-42, 2014. | DOI : 10.1016/j.molcel.2014.02.019

GARCIA D., GARCIA S. and VOINNET O.

Nonsense-Mediated Decay Serves as a General Viral Restriction Mechanism in Plants

Cell Host & Microbe, 16(3):391-402, 2014. | DOI : 10.1016/j.chom.2014.08.001

MIETTINEN K., DONG L., NAVROT N., SCHNEIDER T., BURLAT V., POLLIER J., WOITTIEZ L., VAN DER KROL S., LUGAN R., ILC T., VERPOORTE R., OKSMAN-CALDENTEY K.M., MARTINOIA E., BOUWMEESTER H., GOOSSENS A., MEMELINK L. and WERCK D.

The seco-iridoid pathway from Catharanthus roseus.

Nature Communications, 5:3606:doi10.1038/:ncomms4606, 2014. | DOI : 10.1038/ncomms4606

HAMMANI K. and GIEGÉ P.

RNA metabolism in plant mitochondria

Trends in Plant Science, 19(6):380-389, 2014. | DOI : 10.1016/j.tplants.2013.12.008

BERNARDO-GARCIA S., DE LUCAS M., MARTINEZ C., ESPINOSA-RUIZ A., DAVIÈRE J.M. and PRAT S.

BR-dependent phosphorylation modulates PIF4 transcriptional activity and shapes diurnal hypocotyl growth.

Genes and Development, 28(15):1681-94, 2014. | DOI : 10.1101/gad.243675.114

MICHAUD M., UBRIG E., FILLEUR S., ERHARDT M., EPHRITIKHINE G., MARÉCHAL-DROUARD L. and DUCHÊNE A.M.

Differential targeting of VDAC3 mRNA isoforms influences mitochondria morphology

Proceedings of the National Academy of Sciences of the United States of America, 111(24):8991-8996, 2014. | DOI : 10.1073/pnas.1402588111

UDDIN M., DUNOYER P., SCHOTT G., AKHTER S., SHI C., LUCAS W., VOINNET O. and KIM J.Y.

The protein kinase TOUSLED facilitates RNAi in Arabidopsis.

Nucleic Acids Research, 42(12):7971-7980, 2014. | DOI : 10.1093/nar/gku422

SALINAS-GIEGÉ T., EL FAROUK-AMEQRANE S., UBRIG E., SAUTER C., DUCHÊNE A.M. and MARÉCHAL-DROUARD L.

Molecular basis for the differential interaction of plant mitochondrial VDAC proteins with tRNAs

Nucleic Acids Research, 42(15):9937-48, 2014. | DOI : 10.1093/nar/gku728

HAMMANI K. and BARKAN A.

An mTERF Domain Protein Functions in Group II Intron Splicing in Maize Chloroplasts

Nucleic Acids Research, 42(8):5033-5042, 2014. | DOI : 10.1093/nar/gku112

NGONDO P. and CARBON P.

Transcription factor abundance controlled by an auto-regulatory mechanism involving a transcription start site switch

Nucleic Acids Research, 42(4):2171–2184, 2014. | DOI : 10.1093/nar/gkt1136

DAVIÈRE J.M., WILD M., REGNAULT T., BAUMBERGER N., EISLER H., GENSCHIK P. and ACHARD P.

Class I TCP-DELLA interactions in inflorescence shoot apex determine plant height

Current Biology, 24(16):1923-8, 2014. | DOI : 10.1016/j.cub.2014.07.012

XU J., DING Z.W., VIZCAY-BARRENA G., SHI J.X., LIANG W.Q., YUAN Z., WERCK D., SCHREIBER L., WILSON Z.A. and ZHANG D.B.

ABORTED MICROSPORES Acts as a Master Regulator of Pollen Wall Formation in Arabidopsis

Plant Cell, 26(4):1544-1556, 2014. | DOI : 10.1105/tpc.114.122986

AMARI K., DI DONATO M., DOLJA V.V. and HEINLEIN M.

Myosins VIII and XI play distinct roles in replication and transport of Tobacco mosaic virus.

PLoS pathogens, 10(10):e1004448, 2014. | DOI : 10.1371/journal.ppat.1004448

SHAFIQ S., BERR A. and SHEN W.H.

Combinatorial functions of diverse histone methylations in Arabidopsis thaliana flowering time regulation

New Phytologist, 201:312-322, 2014. | DOI : 10.1111/nph.12493

RANDOUX M., DAVIÈRE J.M., JEAUFFRE J., THOUROUDE T., PIERRE S., TOUALBIA Y., PERROTTE J., REYNOIRD J.P., JAMMES M.J., HIBRAND-SAINT OYANT L. and FOUCHER F.

RoKSN, a floral repressor, forms protein complexes with RoFD and RoFT to regulate vegetative and reproductive development in rose

New Phytologist, 202(1):161-73, 2014. | DOI : 10.1111/nph.12625

COUTURIER J., WU M.C., DHALLEINE T., PÉGEOT H., SUDRE D., GUALBERTO J.M., JACQUOT J.P., GAYMARD F., VIGNOLS F. and ROUHIER N.

Monothiol glutaredoxin-BolA interactions: redox control of Arabidopsis thaliana BolA2 and SufE1

Molecular Plant, 7(1):187-205, 2014. | DOI : 10.1093/mp/sst156

RENAULT H., BASSARD J.E., HAMBERGER B. and WERCK D.

Cytochrome P450-mediated metabolic engineering: current progress and future challenges.

Current Opinion in Plant Biology, 19:27-34, 2014. | DOI : 10.1016/j.pbi.2014.03.004

LANGE H., ZUBER H., SEMENT F.M., CHICHER J., KUHN L., HAMMANN P., BRUNAUD V., BÉRARD C., BOUTEILLER N., BALZERGUE S., AUBOURG S., MARTIN-MAGNIETTE M.L., VAUCHERET H. and GAGLIARDI D.

The RNA Helicases AtMTR4 and HEN2 Target Specific Subsets of Nuclear transcripts for Degradation by the Nuclear Exosome in Arabidopsis thaliana

PLoS Genetics, 10(8):e1004564, 2014. | DOI : 10.1371/journal.pgen.1004564

MOLITOR A.M., BU Z., YU Y. and SHEN W.H.

Arabidopsis AL PHD-PRC1 complexes promote seed germination through H3K4me3-to-H3K27me3 chromatin state switch in repression of seed developmental genes

PLoS Genetics, 10(1):e1004091, 2014. | DOI : 10.1371/journal.pgen.1004091

BLÉE E., BOACHON B., BURCKLEN M., LE GUÉDARD M., HANANO A., HEINTZ D., EHLTING J., HERRFURTH C., FEUSSNER I. and BESSOULE J.J.

The Reductase Activity of the Arabidopsis Caleosin RESPONSIVE TO DESSICATION20 Mediates Gibberellin-Dependent Flowering Time, Abscisic Acid Sensitivity, and Tolerance to Oxidative Stress.

Plant Physiology, 166(1):109-124, 2014. | DOI : 10.1104/pp.114.245316

HUCHELMANN A., GASTALDO C., VEINANTE M., ZENG Y., HEINTZ D., TRITSCH D., SCHALLER H., ROHMER M., BACH T.J. and HEMMERLIN A.

S-Carvone suppresses cellulase-induced capsidiol production in Nicotiana tabacum by interfering with protein isoprenylation.

Plant Physiology, 164:935-950, 2014. | DOI : 10.1104/pp.113.232546

HÖFER R., BOACHON B., RENAULT H., GAVIRA C., MIESCH L., IGLESIAS J., GINGLINGER J.F., ALLOUCHE L., MIESCH M., GREC S., LARBAT R. and WERCK D.

Dual function of the cytochrome P450 CYP76 family from Arabidopsis thaliana in the metabolism of monoterpenols and phenylurea herbicides.

Plant Physiology, 166(3):1149-61, 2014. | DOI : 10.1104/pp.114.244814

WENG M., YANG Y., FENG H., PAN Z., SHEN W.H., ZHU Y. and DONG A.

Histone chaperone ASF1 is involved in gene transcription activation in response to heat stress in Arabidopsis thaliana.

Plant Cell and Environment, 37(9):2128-38, 2014. | DOI : 10.1111/pce.12299

BIDZINSKI P., NOIR S., SHAHI S., REINSTÄDLER A., GRATKOWSKA D.M. and PANSTRUGA R.

Physiological characterization and genetic modifiers of aberrant root thigmomorphogenesis in mutants of Arabidopsis thaliana?MILDEW LOCUS O genes.

Plant Cell and Environment, 37(12):2738-2753, 2014. | DOI : 10.1111/pce.12353

GRAUSEM B., WIDEMANN E., VERDIER G., D. N., AUBERT Y., BEISSON F., SCHREIBER L., FRANKE R. and PINOT F.

CYP77A19 and CYP77A20 characterized from Solanum tuberosum oxidize fatty acids in vitro and partially restore the wild phenotype in an Arabidopsis thaliana cutin mutant.

Plant Cell and Environment, 37(9):2102-15, 2014. | DOI : 10.1111/pce.12298

AOKI H., TERAMURA H., SHCHEPETILNIKOV M., RYABOVA L., KUSANO H. and SHIMADA H.

Enhanced translation of the downstream ORF attributed to a long 5 ′ untranslated region in the OsMac1 gene family members, OsMac2 and OsMac3

Plant Biotechnology, 31:221-228, 2014.

LAN Z., KROSSE S., ACHARD P., VAN DAM N.M. and BEDE J.C.

DELLA proteins modulate Arabidopsis defences induced in response to caterpillar herbivory

Journal of Experimental Botany, 65(2):571-583, 2014. | DOI : 10.1093/jxb/ert420

GENSCHIK P., MARROCCO K., BACH L., NOIR S. and CRIQUI M.C.

Selective protein degradation: a rheostat to modulate cell-cycle phase transitions.

Journal of Experimental Botany, 65(10):2603-2615, 2014. | DOI : 10.1093/jxb/ert426

REGNAULT T., DAVIÈRE J.M., HEINTZ D., LANGE T. and ACHARD P.

The gibberellin biosynthetic genes AtKAO1 and AtKAO2 have overlapping roles throughout Arabidopsis development.

Plant Journal, 80(3):462-74, 2014. | DOI : 10.1111/tpj.12648

CHEN K., DORLHAC DE BORNE F., SZEGEDI E. and OTTEN L.

Deep sequencing of the ancestral tobacco species Nicotiana tomentosiformis reveals multiple T-DNA inserts and a complex evolutionary history of natural transformation in the genus Nicotiana

Plant Journal, 80(4):669-682, 2014. | DOI : 10.1111/tpj.12661

XING S., VAN DEENEN N., MAGLIANO P., FRAHM L., FORESTIER E., NAWRATH C., SCHALLER H., GRONOVER C.S., PRÜFER D. and POIRIER Y.

ATP citrate lyase activity is post-translationally regulated by sink strength and impacts the wax, cutin and rubber biosynthetic pathways

Plant Journal, 79:270-284, 2014. | DOI : 10.1111/tpj.12559

DOIMO M., TREVISSON E., AIRIK R., BERGDOLL M., SANTOS-OCANA C., HILDEBRANDT F., NAVAS P., PIERREL F. and SALVIATI L.

Effect of vanillic acid on COQ6 mutants identified in patients with coenzyme Q10 deficiency

Biochimica et Biophysica Acta - Molecular Basis of Disease, 1842:1-6, 2014. | DOI : 10.1016/j.bbadis.2013.10.007

NASSER K., THALLA J., ORAIN P.Y., THIBON A., SANDRONI M., WELTER R. and MANDON D.

Steric Congestion at, and Proximity to, a Ferrous Center Leads to Hydration of ??Nitrile Substituents Forming Coordinated Carboxamides

Inorganic Chemistry, 53(15):7824-7836, 2014. | DOI : 10.1021/ic500096h

DERRIEN B. and GENSCHIK P.

When RNA and protein degradation pathways meet

Frontiers in Plant Science, 5(23):161, 2014. | DOI : 10.3389/fpls.2014.00161

GONZALES D.H. and GIEGÉ P.

Biogenesis of the oxidative phosphorylation machinery in plants. From gene expression to complex assembly.

Frontiers in Plant Science, 5:225, 2014. | DOI : 10.3389/fpls.2014.00225

FENG J. and SHEN W.H.

Dynamic regulation and function of histone monoubiquitination in plants.

Frontiers in Plant Science, 5(83):doi:10.3389/fpls.2014.0083, 2014. | DOI : 10.3389/fpls.2014.00083

BATZENSCHLAGER M., HERZOG E., HOULNÉ G., SCHMIT A.C. and CHABOUTÉ M.E.

GIP/MZT1 proteins orchestrate nuclear shaping

Frontiers in Plant Science, 5(Feb 7):29, 2014. | DOI : 10.3389/fpls.2014.00029

KLEIN E., BRAULT V., WEYENS G., LEFEBVRE M., ZIEGLER-GRAFF V. and GILMER D.

Divergence of host range and biological properties between natural isolate and full-length infectious cDNA clone of the Beet mild yellowing virus 2ITB

Molecular Plant Pathology, 15(1):22-30, 2014. | DOI : 10.1111/mpp.12061

MENARD R., VERDIER G., ORS M., ERHARDT M., BEISSON F. and SHEN W.H.

Histone H2B monoubiquitination is involved in the regulation of cutin and wax composition in Arabidopsis thaliana

Plant and Cell Physiology, 55(2):455-466, 2014. | DOI : 10.1093/pcp/pct182

GUO J., CARRINGTON Y., ALBER A. and EHLTING J.

Molecular characterization of Quinate and Shikimate metabolism in Populus trichocarpa.

Journal of Biological Chemistry, 289(34):23846-23858, 2014. | DOI : 10.1074/jbc.M114.558536

FLIEDEL C., ROSA V., SANTOS C.I., GONZALES P.J., ALMEIDA R.M., GOMES C.S., GOMES P.T., LEMOS M.A., AULLON G., WELTER R. and AVILES T.

Copper(II) complexes of bis(aryl-imino)-acenaphthene ligands : synthesis, structure, DFT studies and evaluation in reverse ATRP of styrene.

Dalton Transactions, 43(34):13041-13054, 2014. | DOI : 10.1039/c4dt01069h

ARCHAMBAULT C., BENDER R., BRAUNSTEIN P., DUSAUSOY Y. and WELTER R.

Reactions of trinuclear platinum clusters with electrophiles: ionisation isomerism with [Pt3(?2-I)(?-PPh2)2(PPh3)3]I and [Pt3(?-PPh2)2I2(PPh3)3]. Structures of [Pt3(?2-Cl)(?-PPh2)2(PPh3)3]PF6, [Pt3(?-PPh2)2I2(PPh3)3] and of the Pt-Ag cluster [Pt3?3-AgBF4(?2-I)(?-PPh2)2(PPh3)3]BF4.

Dalton Transactions, 43(23):8609-8619, 2014. | DOI : 10.1039/c4dt00090k

PASQUET J.C., CHAOUCH S., MACADRÉ C., BALZERGUE S., HUGUET S., MARTIN-MAGNIETTE M.L., BELLVERT F., DEGUERCY X., THAREAU V., HEINTZ D., SAINDRENAN P. and DUFRESNE M.

Differential gene expression and metabolomic analyses of Brachypodium distachyon infected by deoxynivalenol producing and non-producing strains of Fusarium graminearum.

BMC Genomics, Jul 25;15:1471-2164, 2014. | DOI : 10.1186/1471-2164-15-629

RAHIER A. and KARST F.

Plant cyclopropylsterol-cycloisomerase : key amino-acids affecting activity and substrate specificity.

Biochemical Journal, 459(2):289-299, 2014. | DOI : 10.1042/BJ20131239

LALLEMENT P.A., MEUX E., GUALBERTO J.M., PROSPER P., DIDIERJEAN C., SAUL F., HAOUZ A., ROUHIER N. and HECKER A.

Structural and enzymatic insights into Lambda glutathione transferases from Populus trichocarpa, monomeric enzymes constituting an early divergent class specific to terrestrial plants

Biochemical Journal, 462(1):39-52, 2014. | DOI : 10.1042/BJ20140390

GUALBERTO J.M. and KÜHN K.

DNA-binding proteins in plant mitochondria : implications for transcription

Mitochondrion, 19:323-328, 2014. | DOI : 10.1016/j.mito.2014.02.004

CHEN D., HUANG Y., LIU C., RUAN Y. and SHEN W.H.

Functional conservation and divergence of J-domain-containing ZUO1/ZRF orthologs throughout evolution

Planta, 239:1159-1173, 2014. | DOI : 10.1007/s00425-014-2058-6

TIBURCIO A.F., ALTABELLA T., BITRIAN M. and ALCAZAR R.

The roles of Polyamines during the lifespan of plants : from development to stress.

Planta, 240:1-18, 2014. | DOI : 10.1007/s00425-014-2055-9

DE CRAENE J.O., COURTE F., RINALDI B., FITTERER C., HERRANZ M.C., KEICHINGER C., RITZENTHALER C. and FRIANT S.

Study of the Plant COPII Vesicle Coat Subunits by Functional Complementation of Yeast Saccharomyces cerevisiae Mutants

PLoS ONE, 9(2):e90072, 2014. | DOI : 10.1371/journal.pone.0090072

PENA E.J., FERRIOL I., SAMBADE A., BUSCHMANN H., NIEHL A., ELENA S.F., RUBIO L. and HEINLEIN M.

Experimental plant virus evolution reveals a role of microtubule dynamics and TORTIFOLIA1/SPIRAL2 in RNA trafficking.

PLoS ONE, 9(8):e105364, 2014. | DOI : 10.1371/journal.pone.0105364

BOISSINOT S., ERDINGER M., MONSION B., ZIEGLER-GRAFF V. and BRAULT V.

Both structural and non-structural forms of the readthrough protein of Cucurbit aphid-borne yellows virus are essential for efficient systemic infection of plants.

PLoS ONE, 9(4):e93448, 2014. | DOI : 10.1371/journal.pone.0093448

LIAO P., WANG H., WANG M., HSIAO A.S., BACH T.J. and CHYE M.L.

Transgenic tobacco overexpressing Brassica juncea HMG-CoA synthase 1 shows increased plant growth, pod size and seed yield

PLoS ONE, 9(5)(5):e98624, 2014. | DOI : 10.1371/journal.pone.0098264

DE GHELLINCK A., SCHALLER H., LAUX V., HAERTLEIN M., SFERRAZZA M., MARÉCHAL E., WACKLIN H., JOUHET J. and FRAGNETO G.

Production and Analysis of Perdeuterated Lipids from Pichia pastoris Cells

PLoS ONE, 9(4):e92999, 2014. | DOI : 10.1371/journal.pone.0092999

GAS-PASCUAL E., BERNA A., BACH T.J. and SCHALLER H.

Plant oxidosqualene metabolism: cycloartenol synthase-dependent sterol biosynthesis in Nicotiana benthamiana.

PLoS ONE, 9(10):e109156, 2014. | DOI : 10.1371/journal.pone.0109156

NIEHL A., PASQUIER A., FERRIOL I., MÉLY Y. and HEINLEIN M.

Comparison of the Oilseed rape mosaic virus and Tobacco mosaic virus movement proteins (MP) reveal common and dissimilar MP functions for tobamovirus spread.

Virology, 456-457:43-54, 2014. | DOI : 10.1016/j.virol.2014.03.007

HIPPER C., MONSION B., BORTOLAMIOL-BÉCET D., ZIEGLER-GRAFF V. and BRAULT V.

Formation of virions is strictly required for Turnip yellows virus long-distance movement in plants

Journal of General Virology, 95:496-505, 2014. | DOI : 10.1099/vir.0.058867-0

LIAO P., WANG H., HEMMERLIN A., NAGEGOWDA D.A., BACH T.J., WANG M. and CHYE M.L.

Past achievements, current status and future perspectives of studies on 3-hydroxy-3-methylglutaryl-CoA synthase (HMGS) in the mevalonate (MVA) pathway.

Plant Cell Reports, 33:1005-1022, 2014. | DOI : 10.1007/s00299-014-1592-9

NGONDO P. and CARBON P.

ZNF143 is regulated through alternative 3'UTR isoforms.

Biochimie, 104:137-146, 2014. | DOI : 10.1016/j.biochi.2014.06.008

SALINAS-GIEGÉ T., LAROSA V., CARDOL P., MARÉCHAL-DROUARD L. and REMACLE C.

Respiratory-deficient mutants of the unicellular green alga Chlamydomonas : A review

Biochimie, 100:207-218, 2014. | DOI : 10.1016/j.biochi.2013.10.006

MICHAUD M., MARÉCHAL-DROUARD L. and DUCHÊNE A.M.

Targeting of cytosolic mRNA to mitochondria : naked RNA can bind to the mitochondrial surface

Biochimie, 100:159-166, 2014. | DOI : 10.1016/j.biochi.2013.11.007

HUOT J.L., ENKLER L., MEGEL C., KARIM L., LAPORTE D., BECKER H.D., DUCHÊNE A.M., SISSLER M. and MARÉCHAL-DROUARD L.

Idiosyncrasies in decoding mitochondrial genomes

Biochimie, 100:95-106, 2014. | DOI : 10.1016/j.biochi.2014.01.004

HEMMERLIN A., TRITSCH D., HAMMANN P., ROHMER M. and BACH T.J.

Profiling of defense responses in Escherichia coli treated with fosmidomycin

Biochimie, 99:54-62, 2014. | DOI : 10.1016/j.biochi.2013.11.008

HAMMANI K., BONNARD G., BOUCHOUCHA A., GOBERT A., PINKER F., SALINAS-GIEGÉ T. and GIEGÉ P.

Helical repeats modular proteins are major players for organelle gene expression.

Biochimie, 100:141-150, 2014. | DOI : 10.1016/j.biochi.2013.08.031

GUALBERTO J.M., MILESHINA D., WALLET C., NIAZI A.K., LOTFI F. and DIETRICH A.

The plant mitochondrial genome : Dynamics and maintenance

Biochimie, 100:107-120, 2014. | DOI : 10.1016/j.biochi.2013.09.016

DOMINGO A., SPECKLIN D., ROSA V., MAMERI S., ROBERT V. and WELTER R.

Probing the influence of the ligands on the magnetism of dinuclear manganese, Iron, and Chromium complexes supported by Aroylhydrazone

European Journal of Inorganic Chemistry, 15:2552-2560, 2014.

DELFOSSE V.C., AGROFOGLIO Y.C., CASSE M.F., KRESIC I.B., HOPP H.E., ZIEGLER-GRAFF V. and DISTÉFANO A.J.

The P0 protein encoded by cotton leafroll dwarf virus (CLRDV) inhibits local but not systemic RNA silencing

Virus Research, 180:70-75, 2014. | DOI : 10.1016/j.virusres.2013.12.018

BOACHON B., GAMIR J., PASTOR V., ERB M., DEAN J.V., FLORS V. and MAUCH-MANI B.

Role of two UDP-Glycosyltransferases from the L group of arabidospsis in resisitance against pseudomonas syringae.

European Journal of Plant Pathology, 139:707-720, 2014.

LOTFI F., MILESHINA D.V., IBRAHIM N., KOULINTCHENKO M.V., D'SOUZA G.G.M., SAXENA V., KONSTANTINOV Y.M., LIGHTOWLERS R.N. and DIETRICH A.

DNA import competence and mitochondrial genetics

Biopolymers and Cell, 30:71-73, 2014.

KOULINTCHENKO M.V., IBRAHIM N., KLIMENKO E.S., KONSTANTINOV Y.M., LOTFI F. and DIETRICH A.

Specificity of DNA import into isolated mitochondria from plants and mammals.

Biopolymers and Cell, 30:68-70, 2014.

BURBRIDGE E., RASMUSSEN S.K., BERNIER F., KRISTENSEN B.K., MCCABE P.F. and DIX P.J.

Altered activity of Peroxidase and Oxalate Oxidase influences lignification in Transgenic Tobacco.

The Open Plant Science Journal, 8:1-8, 2014.

SEMENT F.M. and GAGLIARDI D.

Detection of uridylated mRNAs.

In: Joanna Rorbach, Agnieszka J. Bobrowicz (eds) Polyadenylation. Methods and protocols, vol 1125. Springer., 2014. | DOI : 10.1007/978-1-62703-971-0_4

STITZ M., HARTL M., BALDWIN I.T. and GAQUEREL E.

Jasmonoyl-l-isoleucine coordinates metabolic networks required for anthesis and floral attractant emission in wild tobacco (Nicotiana attenuata)

Plant Cell, , 2014.

GULATI J. and BALDWIN I.T.

The roots of plant defenses: integrative multivariate analyses uncover dynamic behaviors of gene and metabolic networks of roots elicited by leaf herbivory

Plant Physiology, 880-892, 2014.

GAQUEREL E., GULATI J. and BALDWIN I.T.

Revealing insect herbivory‐induced phenolamide metabolism: from single genes to metabolic network plasticity analysis

Plant Journal, , 2014.

WALTER W., STRIBERNY B., GAQUEREL E., BALDWIN I.T., KIM S.G. and HEILAND I.

Improving the accuracy of expression data analysis in time course experiments using resampling

BMC Bioinformatics, , 2014.

HEINLEIN M.

Viral transport and interaction with the host cytoskeleton.

In: Springer (ed) Plant-virus interactions: Molecular biology, inter- and intercellular transport, T. Kleinow., 2014. | DOI : 10.1007/978-3-319-24589-0

SHCHEPETILNIKOV M. and RYABOVA L.

Cauliflower mosaic virus (CaMV) upregulates translation reinitiation of its pregenomic polycistronic 35S RNA via interaction with the cell’s translation machinery

In: R.K. Gaur, Thomas Hohn, Pradeep Sharma (eds) Plant Virus–Host Interaction, chapter 17. Elsevier Science., 2014.

FU H., GORING D.R. and GENSCHIK P.

Reversible ubiquitylation in plant biology

Frontiers in Plant Science, , 2014.